Transcript ID | Breast | Kidney | Liver | Ovary | Placenta | Testis |
---|---|---|---|---|---|---|
ENSMUST00000048028 | 0.091±0.05 | 0.016±0.01 | 0.363±0.17 | 0.249±0.00 | 0.795±0.00 | 73.115±2.80 |
Transcript Info |
||||||
Description: | stromal antigen 3 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000048028 | Stag3-001 | ENSMUSG00000036928 | 10090 | + | 5:138280526-138312393 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0008QI | CIL_0008QI_0002 | VISTA | 5:137705744-138314172 |
CIL_0005CH | CIL_0005CH_0002 | CGP | 5:138264952-138312393 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000775 | IEA | chromosome, centromeric region |
GO:0000794 | IDA | condensed nuclear chromosome |
GO:0000795 | IDA | synaptonemal complex |
GO:0000800 | IDA | lateral element |
GO:0000802 | IDA | transverse filament |
GO:0001673 | IDA | male germ cell nucleus |
GO:0005515 | IPI | protein binding |
GO:0005634 | IEA | nucleus |
GO:0005654 | TAS | nucleoplasm |
GO:0005730 | IEA | nucleolus |
GO:0007065 | ISS | male meiosis sister chromatid cohesion |
GO:0007066 | ISS | female meiosis sister chromatid cohesion |
GO:0030893 | IDA | meiotic cohesin complex |
GO:0034991 | IDA | nuclear meiotic cohesin complex |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENST00000317296 | STAG3-001 | protein_coding | Homo_sapiens | 0 | 3038 |
ENST00000328453 | GATS-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 196 |
ENST00000369872 | SYPL2-001 | protein_coding | Homo_sapiens | 0.0003 | 53 |
ENST00000394018 | STAG3-003 | protein_coding | Homo_sapiens | 0 | 2769 |
ENST00000426455 | STAG3-004 | protein_coding | Homo_sapiens | 0 | 3038 |
ENST00000436886 | GATS-014 | protein_coding | Homo_sapiens | 0 | 196 |
ENST00000440830 | STAG3-006 | processed_transcript | Homo_sapiens | 0 | 2111 |
ENST00000476057 | STAG3-021 | retained_intron | Homo_sapiens | 0 | 261 |
ENST00000477469 | STAG3-016 | retained_intron | Homo_sapiens | 0 | 318 |
ENST00000479359 | STAG3-017 | retained_intron | Homo_sapiens | 0 | 636 |
ENST00000491498 | STAG3-020 | processed_transcript | Homo_sapiens | 0 | 2111 |
ENST00000496157 | STAG3-002 | retained_intron | Homo_sapiens | 0 | 1672 |
ENST00000543273 | GATS-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 196 |
ENST00000615138 | STAG3-201 | protein_coding | Homo_sapiens | 0 | 3053 |
ENST00000620100 | STAG3-202 | protein_coding | Homo_sapiens | 0 | 2769 |