C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit gamma 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048774 Copg2-201 ENSMUSG00000025607 10090 - 6:30747554-30896739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048774
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048774 18.204±6.62 11.327±1.29 18.112±2.46 25.899±11.76 8.393±2.23 6.411±0.70 6.163±1.34 7.686±1.35 11.028±5.98 7.836±1.84 3.444±0.51 9.444±2.31 11.698±5.84 4.674±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_0006OS CIL_0006OS_0002 CGP 6:30653457-30748455
CIL_000271 CIL_000271_0002 CGP 6:30723547-30896794
CIL_00027C CIL_00027C_0002 CGP 6:30747554-30915573

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0006886 IEA intracellular protein transport
GO:0006891 IEA intra-Golgi vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000043660 copg2-001 protein_coding Danio_rerio 0 1448
ENST00000330992 COPG2-003 protein_coding Homo_sapiens 0 2996
ENST00000425248 COPG2-001 protein_coding Homo_sapiens 0 3749
ENST00000456951 TSGA13-001 protein_coding Homo_sapiens 2e-22 111
ENST00000617523 COPG2-002 retained_intron Homo_sapiens 0 2523

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