C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit gamma 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000043660 copg2-001 ENSDARG00000034823 7955 + 4:15048933-15061583 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000043660
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000043660 22.865±15.02 22.118±4.65 7.304±0.00 4.201±0.00 11.542±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005488 IEA binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030126 IEA COPI vesicle coat
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048774 Copg2-201 protein_coding Mus_musculus 0 1448
ENSMUST00000049966 Copg1-003 protein_coding Mus_musculus 0 248
ENSMUST00000113607 Copg1-001 protein_coding Mus_musculus 0 1376
ENSMUST00000122833 Copg2-006 retained_intron Mus_musculus 0 573
ENSMUST00000131256 Copg2-002 processed_transcript Mus_musculus 0 573
ENSMUST00000134137 Copg2-003 processed_transcript Mus_musculus 0.00000002 62
ENSMUST00000135230 Copg2-001 protein_coding Mus_musculus 0 573
ENSMUST00000137717 Copg1-002 retained_intron Mus_musculus 0.000001 60
ENSMUST00000166192 Copg2-202 protein_coding Mus_musculus 0 846
ENST00000314797 COPG1-001 protein_coding Homo_sapiens 0 1258
ENST00000330992 COPG2-003 protein_coding Homo_sapiens 0 1308
ENST00000425248 COPG2-001 protein_coding Homo_sapiens 0 1445
ENST00000504547 COPG1-015 retained_intron Homo_sapiens 0 411
ENST00000515725 COPG1-002 retained_intron Homo_sapiens 0 1131

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