C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 55b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049312 Tmem55b-002 ENSMUSG00000035953 10090 - 14:50927215-50930856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLungPlacentaENSMUST00000049312
Transcript ID Adipose Bladder Colon Heart Kidney Lung Placenta
ENSMUST00000049312 16.290±0.52 16.306±1.38 7.648±1.11 2.317±0.00 7.826±2.98 9.822±1.43 10.298±5.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z3 CIL_0004Z3_0003 CGP 14:50906478-50927139
CIL_0001O8 CIL_0001O8_0002 CGP 14:50924968-50930856
CIL_0001O9 CIL_0001O9_0002 CGP 14:50926070-50965237

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250489 TMEM55B-001 protein_coding Homo_sapiens 0 1567
ENST00000398020 TMEM55B-003 protein_coding Homo_sapiens 0 1471
ENST00000554028 TMEM55B-005 protein_coding Homo_sapiens 0 680
ENST00000556093 TMEM55B-004 protein_coding Homo_sapiens 0 298
ENST00000557041 TMEM55B-002 retained_intron Homo_sapiens 0 713

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