C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 55B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557041 TMEM55B-002 ENSG00000165782 9606 - 14:20457858-20461401 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000557041
Transcript ID Testis
ENST00000557041 1.976±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z3 CIL_0004Z3_0002 CGP 14:20446411-20457772
CIL_0001O8 CIL_0001O8_0001 CGP 14:20455191-20461612
CIL_0001O9 CIL_0001O9_0001 CGP 14:20457719-20477094

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159745 Tmem55b-005 retained_intron Mus_musculus 0 728
ENSMUST00000049312 Tmem55b-002 protein_coding Mus_musculus 0 713
ENSMUST00000161166 Tmem55b-004 protein_coding Mus_musculus 0 713
ENSMUST00000162957 Tmem55b-003 protein_coding Mus_musculus 0 713
ENSMUST00000160835 Tmem55b-001 protein_coding Mus_musculus 0 713
ENSMUST00000163043 Tmem55b-009 retained_intron Mus_musculus 0 265
ENSMUST00000162935 Tmem55b-008 retained_intron Mus_musculus 0 265
ENSMUST00000163088 Tmem55b-010 retained_intron Mus_musculus 0 265
ENSMUST00000160538 Tmem55b-007 protein_coding Mus_musculus 0 265

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