C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001O9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165782-ENSG00000198805 CGP 9606 14:20457719-20477094
GeneTranscriptPositionBiotype
ENSG00000100823 (APEX1)
APEX nuclease (multifunctional DNA repair enzyme) 1 		ENST00000216714 (APEX1-001) 20455195-20457767 protein_coding
ENST00000398030 (APEX1-008) 20455226-20457767 protein_coding
ENST00000438886 (APEX1-003) 20456007-20457222 protein_coding
ENST00000553368 (APEX1-019) 20455245-20456031 protein_coding
ENST00000553555 (APEX1-007) 20455226-20457734 retained_intron
ENST00000553681 (APEX1-009) 20455201-20457342 protein_coding
ENST00000554325 (APEX1-015) 20455227-20456683 nonsense_mediated_decay
ENST00000554813 (APEX1-010) 20455215-20457139 processed_transcript
ENST00000555306 (APEX1-012) 20455226-20457002 retained_intron
ENST00000555414 (APEX1-002) 20455191-20457772 protein_coding
ENST00000555839 (APEX1-016) 20455239-20457366 protein_coding
ENST00000556054 (APEX1-017) 20455247-20457074 protein_coding
ENST00000556296 (APEX1-011) 20455219-20455887 processed_transcript
ENST00000557054 (APEX1-006) 20455247-20457767 protein_coding
ENST00000557150 (APEX1-021) 20455265-20457089 protein_coding
ENST00000557159 (APEX1-005) 20455240-20457738 retained_intron
ENST00000557181 (APEX1-014) 20455227-20456744 protein_coding
ENST00000557344 (APEX1-013) 20455226-20456860 protein_coding
ENST00000557365 (APEX1-020) 20455257-20457302 processed_transcript
ENST00000557592 (APEX1-018) 20455248-20457119 protein_coding
ENSG00000165782 (TMEM55B)
transmembrane protein 55B 		ENST00000250489 (TMEM55B-001) 20457719-20461612 protein_coding
ENST00000398020 (TMEM55B-003) 20457858-20461465 protein_coding
ENST00000553460 (TMEM55B-007) 20457858-20459691 protein_coding
ENST00000553602 (TMEM55B-006) 20458617-20459592 retained_intron
ENST00000554028 (TMEM55B-005) 20458386-20460742 protein_coding
ENST00000556093 (TMEM55B-004) 20460261-20460893 protein_coding
ENST00000557041 (TMEM55B-002) 20457858-20461401 retained_intron
ENSG00000198805 (PNP)
purine nucleoside phosphorylase 		ENST00000361505 (PNP-001) 20469379-20477094 protein_coding
ENST00000553418 (PNP-007) 20468954-20474571 protein_coding
ENST00000553591 (PNP-010) 20469541-20475146 protein_coding
ENST00000554056 (PNP-005) 20469414-20477058 retained_intron
ENST00000554065 (PNP-009) 20470526-20474908 protein_coding
ENST00000556293 (PNP-002) 20469406-20473200 retained_intron
ENST00000556754 (PNP-006) 20473384-20477087 retained_intron
ENST00000557229 (PNP-003) 20469406-20475163 retained_intron
ENSG00000258908 (RP11-203M5.8)
 ENST00000554678 (RP11-203M5.8-001) 20474789-20477089 lincRNA
CIL_0001O9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035953-ENSMUSG00000021871 CGP 10090 14:50926070-50965237
GeneTranscriptPositionBiotype
ENSMUSG00000021871 (Pnp)
purine-nucleoside phosphorylase 		ENSMUST00000048615 (Pnp-001) 50944302-50953412 protein_coding
ENSMUST00000178092 (Pnp-201) 50944506-50965237 protein_coding
ENSMUSG00000035953 (Tmem55b)
transmembrane protein 55b 		ENSMUST00000049312 (Tmem55b-002) 50927215-50930856 protein_coding
ENSMUST00000159047 (Tmem55b-011) 50929024-50929763 retained_intron
ENSMUST00000159745 (Tmem55b-005) 50927217-50930851 retained_intron
ENSMUST00000160538 (Tmem55b-007) 50928826-50930803 protein_coding
ENSMUST00000160835 (Tmem55b-001) 50926070-50930849 protein_coding
ENSMUST00000161166 (Tmem55b-004) 50927215-50930813 protein_coding
ENSMUST00000161669 (Tmem55b-006) 50927866-50929209 protein_coding
ENSMUST00000162935 (Tmem55b-008) 50929258-50930838 retained_intron
ENSMUST00000162957 (Tmem55b-003) 50927215-50930812 protein_coding
ENSMUST00000163043 (Tmem55b-009) 50929335-50930800 retained_intron
ENSMUST00000163088 (Tmem55b-010) 50928922-50930833 retained_intron
ENSMUSG00000035960 (Apex1)
apurinic/apyrimidinic endonuclease 1 		ENSMUST00000049411 (Apex1-001) 50924968-50927139 protein_coding
ENSMUST00000128395 (Apex1-003) 50925285-50927139 protein_coding
ENSMUST00000136753 (Apex1-004) 50924969-50926551 protein_coding
ENSMUST00000154288 (Apex1-002) 50924978-50925608 protein_coding
ENSMUSG00000068417 (Pnp2)
purine-nucleoside phosphorylase 2 		ENSMUST00000095925 (Pnp2-001) 50955992-50964749 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001O9_0001ENSG00000100823ENST00000216714ENST00000398030ENST00000553555ENST00000553681ENST00000555306ENST00000555414ENST00000555839ENST00000556296ENST00000557054ENST00000557159ENST00000557344ENSG00000165782ENST00000250489ENST00000398020ENST00000557041ENSG00000198805ENST00000361505ENST00000553418ENST00000554056ENST00000554065ENST00000556293ENST00000556754ENSG00000258908ENST00000554678CIL_0001O9_0002ENSMUSG00000021871ENSMUST00000048615ENSMUST00000178092ENSMUSG00000035953ENSMUST00000049312ENSMUST00000159745ENSMUST00000160835ENSMUST00000161166ENSMUST00000162935ENSMUST00000162957ENSMUST00000163088ENSMUSG00000035960ENSMUST00000049411ENSMUST00000136753ENSMUSG00000068417ENSMUST00000095925
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100823 ENST00000216714 N/A N/A 4.755±0.00 12.344±0.00 8.824±0.00 7.864±0.00 2.497±0.00 5.656±0.00 10.019±0.00 3.961±0.00 2.503±0.00 30.476±16.13 34.541±10.18 7.153±0.00
ENST00000398030 26.355±0.00 35.831±0.00 N/A 24.998±0.00 42.020±0.00 12.800±7.60 7.996±0.00 26.944±0.00 19.313±0.00 6.723±4.73 19.747±0.00 64.068±0.00 N/A 22.724±0.00
ENST00000438886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553555 N/A N/A N/A N/A N/A N/A 4.913±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000553681 37.554±0.00 64.871±0.00 N/A 51.818±0.00 71.121±0.00 37.303±0.00 16.519±0.00 47.256±0.00 15.089±0.00 19.626±0.00 26.088±0.00 63.829±0.00 N/A 37.996±0.00
ENST00000554325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555306 N/A N/A N/A N/A N/A N/A N/A 4.425±0.00 N/A N/A N/A 18.136±0.00 N/A 8.222±0.00
ENST00000555414 N/A N/A N/A N/A N/A N/A N/A 6.828±0.00 N/A 8.034±0.00 1.716±0.00 33.894±31.65 23.739±2.05 N/A
ENST00000555839 23.254±0.00 N/A N/A N/A N/A 20.225±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.186±0.00 N/A N/A N/A
ENST00000557054 N/A N/A N/A N/A N/A N/A 13.095±0.00 N/A 12.221±1.94 15.187±0.00 20.762±0.00 N/A N/A N/A
ENST00000557150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557159 N/A 19.152±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.596±0.00 44.743±0.00 N/A
ENST00000557365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165782 ENST00000250489 N/A N/A 2.841±0.00 6.219±0.00 N/A N/A N/A N/A N/A 1.996±0.00 N/A N/A N/A N/A
ENST00000398020 12.360±0.00 25.403±0.00 N/A 24.108±0.00 N/A 12.451±0.00 7.909±0.00 18.293±0.00 8.139±0.00 14.693±0.00 12.967±0.00 1.849±0.00 16.031±2.78 14.455±3.40
ENST00000553460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.976±0.00
ENSG00000198805 ENST00000361505 N/A 9.551±0.00 9.103±0.00 7.491±0.00 4.170±0.00 3.769±1.38 4.230±0.00 8.353±0.00 2.310±0.00 15.161±13.62 0.745±0.42 5.605±3.78 90.371±25.90 2.388±0.00
ENST00000553418 N/A N/A N/A N/A N/A N/A 1.110±0.00 N/A N/A N/A N/A N/A 63.277±0.00 N/A
ENST00000553591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554056 N/A N/A N/A N/A 1.558±0.00 N/A N/A 5.244±0.00 N/A 0.758±0.00 N/A 6.905±0.00 N/A N/A
ENST00000554065 N/A N/A N/A N/A 4.035±0.00 N/A N/A N/A N/A N/A N/A 3.768±0.00 N/A N/A
ENST00000556293 N/A N/A N/A N/A 1.993±0.00 1.281±0.00 N/A N/A 1.489±0.00 1.105±0.00 N/A N/A N/A N/A
ENST00000556754 N/A N/A N/A N/A N/A N/A 0.274±0.00 N/A N/A 0.484±0.00 N/A 1.057±0.43 N/A 0.499±0.00
ENST00000557229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258908 ENST00000554678 17.073±0.00 6.977±0.00 N/A 3.478±0.00 4.982±0.62 6.833±2.10 3.309±0.00 20.011±9.13 6.936±0.00 37.395±0.00 N/A 9.531±4.23 40.188±9.36 4.968±3.36
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021871 ENSMUST00000048615 4.275±0.15 1.326±0.33 3.169±0.00 0.933±0.13 3.471±0.86 1.523±0.11 0.913±0.06 3.564±0.81 7.016±1.72 3.111±0.32 0.589±0.14 2.489±1.56 7.219±1.72 0.526±0.05
ENSMUST00000178092 40.095±0.91 10.691±0.57 34.689±0.00 6.705±1.19 31.545±7.09 24.079±0.96 9.893±0.33 48.641±1.04 82.603±31.21 30.135±1.86 2.192±0.57 19.633±2.63 38.707±28.91 2.863±1.19
ENSMUSG00000035953 ENSMUST00000049312 16.290±0.52 N/A 16.306±1.38 N/A N/A 7.648±1.11 2.317±0.00 7.826±2.98 N/A 9.822±1.43 N/A N/A 10.298±5.00 N/A
ENSMUST00000159047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159745 N/A N/A N/A 5.915±3.48 4.723±0.00 N/A 1.621±0.33 N/A 3.315±0.00 5.720±0.00 N/A 3.686±0.06 1.509±0.83 N/A
ENSMUST00000160538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160835 33.407±9.31 14.635±3.79 17.923±8.78 31.781±20.07 25.726±3.15 12.140±3.00 7.905±2.36 13.334±0.77 18.862±9.93 13.023±2.95 5.027±1.05 19.298±7.97 18.928±10.68 16.432±2.10
ENSMUST00000161166 N/A N/A N/A N/A N/A N/A N/A 7.093±1.01 N/A 9.144±0.00 N/A N/A N/A N/A
ENSMUST00000161669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162935 N/A 58.142±17.00 N/A N/A 35.894±8.07 21.853±7.94 N/A 14.339±0.00 9.914±0.68 20.039±3.98 N/A 24.589±7.06 N/A N/A
ENSMUST00000162957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.583±0.00 N/A
ENSMUST00000163043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163088 N/A 45.464±16.35 N/A N/A 44.111±3.03 25.413±5.39 N/A 8.988±0.00 N/A 26.810±9.90 N/A 23.498±12.54 N/A N/A
ENSMUSG00000035960 ENSMUST00000049411 N/A N/A N/A N/A N/A N/A N/A N/A 19.050±8.67 N/A 4.624±1.46 N/A 19.707±0.00 N/A
ENSMUST00000128395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136753 N/A N/A N/A 28.471±0.00 N/A N/A N/A N/A N/A N/A 7.637±1.34 39.766±3.38 45.680±2.92 16.631±0.00
ENSMUST00000154288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000068417 ENSMUST00000095925 1.433±0.36 0.297±0.10 1.278±0.33 0.736±0.60 1.537±0.65 5.006±0.48 0.205±0.10 0.221±0.09 4.822±4.76 0.732±0.09 0.074±0.03 0.290±0.10 3.984±4.53 3.583±1.93

Loading