C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004Z3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045846-ENSDARG00000045843 CGP 7955 4:5200881-5213106
GeneTranscriptPositionBiotype
ENSDARG00000045843 (apex1)
APEX nuclease (multifunctional DNA repair enzyme) 1 		ENSDART00000067374 (apex1-001) 5207237-5213106 protein_coding
ENSDART00000129398 (apex1-201) 5207250-5213077 protein_coding
ENSDART00000150306 (apex1-004) 5207284-5211241 protein_coding
ENSDART00000150409 (apex1-005) 5207451-5211715 protein_coding
ENSDART00000150493 (apex1-003) 5207280-5208064 protein_coding
ENSDART00000150620 (apex1-006) 5207956-5211622 protein_coding
ENSDART00000150780 (apex1-002) 5207257-5211719 protein_coding
ENSDARG00000045846 (osgep)
O-sialoglycoprotein endopeptidase 		ENSDART00000067375 (osgep-002) 5200881-5207220 protein_coding
ENSDART00000144225 (osgep-001) 5200881-5206063 protein_coding
CIL_0004Z3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000092094-ENSG00000100823 CGP 9606 14:20446411-20457772
GeneTranscriptPositionBiotype
ENSG00000092094 (OSGEP)
O-sialoglycoprotein endopeptidase 		ENST00000206542 (OSGEP-001) 20446668-20455105 protein_coding
ENST00000488532 (OSGEP-003) 20451311-20454812 protein_coding
ENST00000553292 (OSGEP-013) 20447065-20447688 retained_intron
ENST00000553640 (OSGEP-005) 20449208-20454812 protein_coding
ENST00000554249 (OSGEP-010) 20447139-20449398 protein_coding
ENST00000554699 (OSGEP-006) 20449222-20454793 processed_transcript
ENST00000554915 (OSGEP-012) 20448024-20449170 retained_intron
ENST00000555223 (OSGEP-007) 20447631-20452452 protein_coding
ENST00000555656 (OSGEP-002) 20446411-20450879 protein_coding
ENST00000555785 (OSGEP-011) 20447678-20449273 protein_coding
ENST00000556124 (OSGEP-009) 20447063-20449557 retained_intron
ENST00000556252 (OSGEP-014) 20451978-20455053 processed_transcript
ENST00000556439 (OSGEP-004) 20451959-20455089 retained_intron
ENSG00000100823 (APEX1)
APEX nuclease (multifunctional DNA repair enzyme) 1 		ENST00000216714 (APEX1-001) 20455195-20457767 protein_coding
ENST00000398030 (APEX1-008) 20455226-20457767 protein_coding
ENST00000438886 (APEX1-003) 20456007-20457222 protein_coding
ENST00000553368 (APEX1-019) 20455245-20456031 protein_coding
ENST00000553555 (APEX1-007) 20455226-20457734 retained_intron
ENST00000553681 (APEX1-009) 20455201-20457342 protein_coding
ENST00000554325 (APEX1-015) 20455227-20456683 nonsense_mediated_decay
ENST00000554813 (APEX1-010) 20455215-20457139 processed_transcript
ENST00000555306 (APEX1-012) 20455226-20457002 retained_intron
ENST00000555414 (APEX1-002) 20455191-20457772 protein_coding
ENST00000555839 (APEX1-016) 20455239-20457366 protein_coding
ENST00000556054 (APEX1-017) 20455247-20457074 protein_coding
ENST00000556296 (APEX1-011) 20455219-20455887 processed_transcript
ENST00000557054 (APEX1-006) 20455247-20457767 protein_coding
ENST00000557150 (APEX1-021) 20455265-20457089 protein_coding
ENST00000557159 (APEX1-005) 20455240-20457738 retained_intron
ENST00000557181 (APEX1-014) 20455227-20456744 protein_coding
ENST00000557344 (APEX1-013) 20455226-20456860 protein_coding
ENST00000557365 (APEX1-020) 20455257-20457302 processed_transcript
ENST00000557592 (APEX1-018) 20455248-20457119 protein_coding
ENSG00000165782 (TMEM55B)
transmembrane protein 55B 		ENST00000250489 (TMEM55B-001) 20457719-20461612 protein_coding
ENST00000398020 (TMEM55B-003) 20457858-20461465 protein_coding
ENST00000553460 (TMEM55B-007) 20457858-20459691 protein_coding
ENST00000553602 (TMEM55B-006) 20458617-20459592 retained_intron
ENST00000554028 (TMEM55B-005) 20458386-20460742 protein_coding
ENST00000556093 (TMEM55B-004) 20460261-20460893 protein_coding
ENST00000557041 (TMEM55B-002) 20457858-20461401 retained_intron
ENSG00000258515 (RP11-203M5.7)
 ENST00000555435 (RP11-203M5.7-001) 20451305-20451918 antisense
CIL_0004Z3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006289-ENSMUSG00000035960 CGP 10090 14:50906478-50927139
GeneTranscriptPositionBiotype
ENSMUSG00000006289 (Osgep)
O-sialoglycoprotein endopeptidase 		ENSMUST00000006452 (Osgep-005) 50915682-50924830 nonsense_mediated_decay
ENSMUST00000159292 (Osgep-001) 50913594-50924893 protein_coding
ENSMUST00000160375 (Osgep-006) 50916694-50924626 protein_coding
ENSMUST00000160393 (Osgep-002) 50906478-50924834 nonsense_mediated_decay
ENSMUST00000160464 (Osgep-007) 50917094-50924843 retained_intron
ENSMUST00000160890 (Osgep-003) 50915686-50924872 nonsense_mediated_decay
ENSMUST00000162177 (Osgep-004) 50915686-50924688 protein_coding
ENSMUST00000162850 (Osgep-008) 50915788-50917374 retained_intron
ENSMUSG00000035953 (Tmem55b)
transmembrane protein 55b 		ENSMUST00000049312 (Tmem55b-002) 50927215-50930856 protein_coding
ENSMUST00000159047 (Tmem55b-011) 50929024-50929763 retained_intron
ENSMUST00000159745 (Tmem55b-005) 50927217-50930851 retained_intron
ENSMUST00000160538 (Tmem55b-007) 50928826-50930803 protein_coding
ENSMUST00000160835 (Tmem55b-001) 50926070-50930849 protein_coding
ENSMUST00000161166 (Tmem55b-004) 50927215-50930813 protein_coding
ENSMUST00000161669 (Tmem55b-006) 50927866-50929209 protein_coding
ENSMUST00000162935 (Tmem55b-008) 50929258-50930838 retained_intron
ENSMUST00000162957 (Tmem55b-003) 50927215-50930812 protein_coding
ENSMUST00000163043 (Tmem55b-009) 50929335-50930800 retained_intron
ENSMUST00000163088 (Tmem55b-010) 50928922-50930833 retained_intron
ENSMUSG00000035960 (Apex1)
apurinic/apyrimidinic endonuclease 1 		ENSMUST00000049411 (Apex1-001) 50924968-50927139 protein_coding
ENSMUST00000128395 (Apex1-003) 50925285-50927139 protein_coding
ENSMUST00000136753 (Apex1-004) 50924969-50926551 protein_coding
ENSMUST00000154288 (Apex1-002) 50924978-50925608 protein_coding
ENSMUSG00000088385 (Gm24689)
predicted gene, 24689 		ENSMUST00000157760 (Gm24689-201) 50918425-50918528 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Z3_0001ENSDARG00000045843ENSDART00000067374ENSDART00000129398ENSDART00000150306ENSDART00000150409ENSDART00000150493ENSDART00000150620ENSDART00000150780ENSDARG00000045846ENSDART00000067375ENSDART00000144225CIL_0004Z3_0002ENSG00000092094ENST00000206542ENST00000488532ENST00000553292ENST00000553640ENST00000554249ENST00000554699ENST00000554915ENST00000555223ENST00000555656ENST00000555785ENST00000556124ENST00000556252ENST00000556439ENSG00000100823ENST00000216714ENST00000398030ENST00000438886ENST00000553368ENST00000553555ENST00000553681ENST00000554325ENST00000554813ENST00000555306ENST00000555414ENST00000555839ENST00000556054ENST00000556296ENST00000557054ENST00000557150ENST00000557159ENST00000557181ENST00000557344ENST00000557365ENST00000557592ENSG00000165782ENST00000250489ENST00000398020ENST00000553460ENST00000553602ENST00000554028ENST00000556093ENST00000557041ENSG00000258515ENST00000555435CIL_0004Z3_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Z3_0001ENSDARG00000045843ENSDART00000067374ENSDART00000129398ENSDART00000150409ENSDART00000150780ENSDARG00000045846ENSDART00000067375ENSDART00000144225CIL_0004Z3_0002ENSG00000092094ENST00000206542ENST00000553292ENST00000553640ENST00000554249ENST00000554699ENST00000555223ENST00000555656ENST00000555785ENST00000556124ENST00000556252ENST00000556439ENSG00000100823ENST00000216714ENST00000398030ENST00000553555ENST00000553681ENST00000555306ENST00000555414ENST00000555839ENST00000556296ENST00000557054ENST00000557159ENST00000557344ENSG00000165782ENST00000250489ENST00000398020ENST00000557041ENSG00000258515ENST00000555435CIL_0004Z3_0003ENSMUSG00000006289ENSMUST00000006452ENSMUST00000159292ENSMUST00000160375ENSMUST00000160464ENSMUST00000160890ENSMUST00000162177ENSMUST00000162850ENSMUSG00000035953ENSMUST00000049312ENSMUST00000159745ENSMUST00000160835ENSMUST00000161166ENSMUST00000162935ENSMUST00000162957ENSMUST00000163088ENSMUSG00000035960ENSMUST00000049411ENSMUST00000136753ENSMUSG00000088385ENSMUST00000157760
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045843 ENSDART00000067374 N/A N/A N/A 16.069±0.72 N/A N/A 4.913±0.04 8.617±0.00 N/A N/A 4.807±0.00 N/A N/A N/A
ENSDART00000129398 N/A N/A N/A 19.872±2.81 N/A N/A 5.398±0.76 9.044±0.32 N/A N/A N/A N/A N/A N/A
ENSDART00000150306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150409 N/A N/A N/A 17.562±0.00 N/A N/A 6.053±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150780 N/A N/A N/A N/A N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A
ENSDARG00000045846 ENSDART00000067375 N/A N/A N/A 1.887±1.66 N/A N/A 5.998±0.87 2.854±0.00 1.208±0.00 N/A 5.629±0.00 N/A N/A N/A
ENSDART00000144225 N/A N/A N/A 2.700±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092094 ENST00000206542 N/A N/A N/A 2.544±0.00 0.976±0.00 1.051±0.34 0.530±0.05 2.478±0.54 1.459±0.04 N/A 1.132±0.22 4.597±0.99 7.878±1.88 1.393±0.00
ENST00000488532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553292 3.266±0.00 N/A N/A N/A 6.064±0.00 3.657±0.00 N/A N/A N/A N/A N/A N/A N/A 4.998±0.00
ENST00000553640 4.636±0.00 N/A N/A N/A N/A N/A 3.882±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000554249 2.326±0.00 11.296±0.00 N/A N/A 3.413±0.00 1.954±0.00 2.730±0.00 4.338±1.40 2.406±0.05 2.896±0.01 1.913±0.73 9.174±5.49 12.161±6.16 8.181±5.59
ENST00000554699 N/A N/A N/A N/A N/A N/A 0.965±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000554915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555223 2.158±0.00 N/A N/A N/A 4.090±0.00 1.857±0.05 N/A N/A 3.475±0.00 3.742±0.00 2.272±0.00 14.614±0.00 17.838±0.00 N/A
ENST00000555656 N/A N/A 0.249±0.00 N/A N/A N/A 0.287±0.00 0.226±0.00 0.577±0.00 0.720±0.00 N/A 1.817±0.00 N/A N/A
ENST00000555785 N/A N/A N/A N/A N/A 3.632±0.00 2.027±0.52 N/A N/A 3.952±0.00 N/A N/A N/A 4.806±0.00
ENST00000556124 N/A 8.363±0.00 N/A N/A N/A N/A N/A N/A N/A 0.894±0.00 N/A 3.034±0.52 N/A N/A
ENST00000556252 N/A N/A N/A N/A N/A N/A 0.686±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000556439 N/A N/A 0.519±0.00 N/A N/A N/A N/A N/A 2.122±0.00 N/A N/A N/A N/A N/A
ENSG00000100823 ENST00000216714 N/A N/A 4.755±0.00 12.344±0.00 8.824±0.00 7.864±0.00 2.497±0.00 5.656±0.00 10.019±0.00 3.961±0.00 2.503±0.00 30.476±16.13 34.541±10.18 7.153±0.00
ENST00000398030 26.355±0.00 35.831±0.00 N/A 24.998±0.00 42.020±0.00 12.800±7.60 7.996±0.00 26.944±0.00 19.313±0.00 6.723±4.73 19.747±0.00 64.068±0.00 N/A 22.724±0.00
ENST00000438886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553555 N/A N/A N/A N/A N/A N/A 4.913±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000553681 37.554±0.00 64.871±0.00 N/A 51.818±0.00 71.121±0.00 37.303±0.00 16.519±0.00 47.256±0.00 15.089±0.00 19.626±0.00 26.088±0.00 63.829±0.00 N/A 37.996±0.00
ENST00000554325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555306 N/A N/A N/A N/A N/A N/A N/A 4.425±0.00 N/A N/A N/A 18.136±0.00 N/A 8.222±0.00
ENST00000555414 N/A N/A N/A N/A N/A N/A N/A 6.828±0.00 N/A 8.034±0.00 1.716±0.00 33.894±31.65 23.739±2.05 N/A
ENST00000555839 23.254±0.00 N/A N/A N/A N/A 20.225±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.186±0.00 N/A N/A N/A
ENST00000557054 N/A N/A N/A N/A N/A N/A 13.095±0.00 N/A 12.221±1.94 15.187±0.00 20.762±0.00 N/A N/A N/A
ENST00000557150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557159 N/A 19.152±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.596±0.00 44.743±0.00 N/A
ENST00000557365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165782 ENST00000250489 N/A N/A 2.841±0.00 6.219±0.00 N/A N/A N/A N/A N/A 1.996±0.00 N/A N/A N/A N/A
ENST00000398020 12.360±0.00 25.403±0.00 N/A 24.108±0.00 N/A 12.451±0.00 7.909±0.00 18.293±0.00 8.139±0.00 14.693±0.00 12.967±0.00 1.849±0.00 16.031±2.78 14.455±3.40
ENST00000553460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.976±0.00
ENSG00000258515 ENST00000555435 N/A N/A N/A N/A N/A 3.873±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006289 ENSMUST00000006452 11.066±0.17 N/A 5.090±0.00 N/A 13.745±4.34 N/A 6.403±1.27 6.477±2.10 N/A N/A 6.220±1.02 N/A 4.267±1.18 6.501±1.01
ENSMUST00000159292 3.059±0.00 N/A N/A 3.199±0.09 1.637±0.46 2.745±0.33 1.380±0.30 1.618±0.39 1.037±0.00 3.695±0.38 N/A 3.690±1.53 0.806±0.36 1.894±0.90
ENSMUST00000160375 N/A N/A N/A 13.361±0.00 10.343±0.00 N/A N/A N/A N/A N/A N/A N/A 10.374±0.00 N/A
ENSMUST00000160393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160464 62.309±17.67 141.164±26.36 17.219±0.00 25.912±6.25 85.351±35.19 63.068±6.24 22.959±5.64 27.984±10.74 20.855±5.69 57.453±11.32 14.285±0.00 108.512±30.87 11.680±7.32 20.137±2.92
ENSMUST00000160890 9.890±2.50 12.784±2.12 3.347±0.00 8.581±2.39 13.007±1.40 7.010±1.30 N/A 5.461±0.23 3.500±0.61 10.089±1.71 N/A 19.751±3.40 2.749±0.15 N/A
ENSMUST00000162177 N/A N/A 6.504±0.00 N/A 21.685±0.00 N/A 6.882±0.28 N/A 9.005±1.95 N/A 18.455±2.72 22.470±0.13 4.745±1.49 N/A
ENSMUST00000162850 N/A N/A 10.762±0.00 34.743±0.00 N/A N/A 13.282±0.16 12.739±1.49 11.103±0.75 N/A 13.120±0.00 38.914±31.08 17.127±12.77 39.140±0.00
ENSMUSG00000035953 ENSMUST00000049312 16.290±0.52 N/A 16.306±1.38 N/A N/A 7.648±1.11 2.317±0.00 7.826±2.98 N/A 9.822±1.43 N/A N/A 10.298±5.00 N/A
ENSMUST00000159047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159745 N/A N/A N/A 5.915±3.48 4.723±0.00 N/A 1.621±0.33 N/A 3.315±0.00 5.720±0.00 N/A 3.686±0.06 1.509±0.83 N/A
ENSMUST00000160538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160835 33.407±9.31 14.635±3.79 17.923±8.78 31.781±20.07 25.726±3.15 12.140±3.00 7.905±2.36 13.334±0.77 18.862±9.93 13.023±2.95 5.027±1.05 19.298±7.97 18.928±10.68 16.432±2.10
ENSMUST00000161166 N/A N/A N/A N/A N/A N/A N/A 7.093±1.01 N/A 9.144±0.00 N/A N/A N/A N/A
ENSMUST00000161669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162935 N/A 58.142±17.00 N/A N/A 35.894±8.07 21.853±7.94 N/A 14.339±0.00 9.914±0.68 20.039±3.98 N/A 24.589±7.06 N/A N/A
ENSMUST00000162957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.583±0.00 N/A
ENSMUST00000163043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163088 N/A 45.464±16.35 N/A N/A 44.111±3.03 25.413±5.39 N/A 8.988±0.00 N/A 26.810±9.90 N/A 23.498±12.54 N/A N/A
ENSMUSG00000035960 ENSMUST00000049411 N/A N/A N/A N/A N/A N/A N/A N/A 19.050±8.67 N/A 4.624±1.46 N/A 19.707±0.00 N/A
ENSMUST00000128395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136753 N/A N/A N/A 28.471±0.00 N/A N/A N/A N/A N/A N/A 7.637±1.34 39.766±3.38 45.680±2.92 16.631±0.00
ENSMUST00000154288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088385 ENSMUST00000157760 N/A N/A 93.113±0.00 N/A N/A 4669.990±0.00 N/A N/A 152.274±0.00 1637.890±0.00 N/A N/A N/A N/A

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