C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crumbs homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050372 Crb2-001 ENSMUSG00000035403 10090 + 2:37776249-37799103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLungOvaryPlacentaENSMUST00000050372
Transcript ID Adipose Bladder Brain Colon Kidney Lung Ovary Placenta
ENSMUST00000050372 1.236±0.10 1.808±0.21 4.617±1.23 0.505±0.03 1.391±0.12 0.847±0.08 1.925±0.56 1.932±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WP CIL_0006WP_0002 CGP 2:37776249-38287390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001707 IMP mesoderm formation
GO:0001756 IMP somitogenesis
GO:0005509 IEA calcium ion binding
GO:0010718 IMP positive regulation of epithelial to mesenchymal transition
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0014028 IMP notochord formation
GO:0016021 IEA integral component of membrane
GO:0019828 IEA aspartic-type endopeptidase inhibitor activity
GO:0019899 IEA enzyme binding
GO:0030513 IMP positive regulation of BMP signaling pathway
GO:0043234 IEA protein complex
GO:0045199 IMP maintenance of epithelial cell apical/basal polarity
GO:0050896 IEA response to stimulus
GO:0070062 IEA extracellular vesicular exosome
GO:0072358 IMP cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373624 DENND1A-002 protein_coding Homo_sapiens 8.40779e-45 187
ENST00000373631 CRB2-001 protein_coding Homo_sapiens 0 3001
ENST00000394219 DENND1A-202 protein_coding Homo_sapiens 8.40779e-45 187
ENST00000460253 CRB2-002 nonsense_mediated_decay Homo_sapiens 0 2058
ENST00000473039 DENND1A-007 processed_transcript Homo_sapiens 8.40779e-45 187

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