C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054556 Taf10-002 ENSMUSG00000043866 10090 - 7:105743237-105744342 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000054556
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000054556 329.831±85.78 170.463±69.70 158.792±24.93 61.044±15.68 60.282±10.38 69.668±25.40 184.993±17.85 56.206±3.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HZ CIL_0001HZ_0002 CGP 7:105732207-105742925
CIL_0003X8 CIL_0003X8_0002 CGP 7:105736592-105744361
CIL_0003WX CIL_0003WX_0002 CGP 7:105739393-105752207

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099364 taf10-001 protein_coding Danio_rerio 7e-23 111
ENSDART00000143397 taf10-002 protein_coding Danio_rerio 7e-23 111
ENST00000299424 TAF10-001 protein_coding Homo_sapiens 0 564
ENST00000527248 TAF10-004 protein_coding Homo_sapiens 7.00005e-41 171
ENST00000531760 TAF10-005 processed_transcript Homo_sapiens 0 292
ENST00000532344 TAF10-003 retained_intron Homo_sapiens 0.00000000000001 84
ENST00000616342 TAF10-002 retained_intron Homo_sapiens 8.99999e-40 171

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