C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527248 TAF10-004 ENSG00000166337 9606 - 11:6610845-6612141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENST00000527248
Transcript ID Brain Liver Muscle
ENST00000527248 15.738±0.00 41.312±0.00 78.783±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HZ CIL_0001HZ_0001 CGP 11:6595075-6610874
CIL_0003X8 CIL_0003X8_0001 CGP 11:6603708-6612667
CIL_0003WX CIL_0003WX_0001 CGP 11:6606296-6619461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006352 IEA DNA-templated transcription, initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131683 Taf10-003 retained_intron Mus_musculus 0 544
ENSMUST00000141116 Taf10-001 protein_coding Mus_musculus 0 544
ENSMUST00000146999 Taf10-004 retained_intron Mus_musculus 0 529
ENSMUST00000095396 Gm4799-201 protein_coding Mus_musculus 0 440
ENSMUST00000054556 Taf10-002 retained_intron Mus_musculus 7.00005e-41 171
ENSMUST00000163389 Ilk-201 protein_coding Mus_musculus 0.000007 55
ENSMUST00000033182 Ilk-001 protein_coding Mus_musculus 0.000007 55

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