C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001HZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132275-ENSG00000166333 CGP 9606 11:6595075-6610874
GeneTranscriptPositionBiotype
ENSG00000132275 (RRP8)
ribosomal RNA processing 8, methyltransferase, homolog (yeast) 		ENST00000254605 (RRP8-001) 6595075-6603620 protein_coding
ENST00000526352 (RRP8-004) 6599943-6601304 retained_intron
ENST00000530762 (RRP8-006) 6601254-6603597 nonsense_mediated_decay
ENST00000533907 (RRP8-002) 6599943-6603604 nonsense_mediated_decay
ENST00000534343 (RRP8-003) 6599920-6603579 protein_coding
ENSG00000166333 (ILK)
integrin-linked kinase 		ENST00000299421 (ILK-001) 6603731-6610870 protein_coding
ENST00000396751 (ILK-003) 6603816-6610870 protein_coding
ENST00000420936 (ILK-002) 6603758-6610833 protein_coding
ENST00000524735 (ILK-012) 6607671-6608418 processed_transcript
ENST00000526114 (ILK-009) 6603773-6609156 nonsense_mediated_decay
ENST00000526318 (ILK-013) 6604296-6610871 protein_coding
ENST00000526711 (ILK-006) 6603731-6610874 nonsense_mediated_decay
ENST00000527121 (ILK-008) 6603782-6609393 nonsense_mediated_decay
ENST00000528784 (ILK-011) 6608266-6610031 retained_intron
ENST00000528995 (ILK-005) 6603787-6610866 protein_coding
ENST00000530016 (ILK-007) 6603774-6610611 retained_intron
ENST00000532063 (ILK-201) 6603708-6610874 protein_coding
ENST00000534565 (ILK-010) 6603796-6604726 processed_transcript
ENST00000534706 (ILK-014) 6608746-6609815 processed_transcript
ENST00000537806 (ILK-004) 6603744-6610835 protein_coding
ENSG00000166337 (TAF10)
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa 		ENST00000299424 (TAF10-001) 6610842-6612667 protein_coding
ENST00000527248 (TAF10-004) 6610845-6612141 protein_coding
ENST00000531760 (TAF10-005) 6611188-6612539 processed_transcript
ENST00000532344 (TAF10-003) 6611401-6612177 retained_intron
ENST00000616342 (TAF10-002) 6606296-6611948 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0001HZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030888-ENSMUSG00000030890 CGP 10090 7:105732207-105742925
GeneTranscriptPositionBiotype
ENSMUSG00000030888 (Rrp8)
ribosomal RNA processing 8, methyltransferase, homolog (yeast) 		ENSMUST00000033179 (Rrp8-001) 105732207-105736781 protein_coding
ENSMUST00000098148 (Rrp8-002) 105732404-105737376 protein_coding
ENSMUST00000127738 (Rrp8-004) 105733006-105734063 processed_transcript
ENSMUST00000137902 (Rrp8-003) 105734692-105736373 processed_transcript
ENSMUST00000148176 (Rrp8-006) 105732640-105733681 retained_intron
ENSMUST00000154852 (Rrp8-005) 105733006-105733946 retained_intron
ENSMUSG00000030890 (Ilk)
integrin linked kinase 		ENSMUST00000033182 (Ilk-001) 105736592-105742925 protein_coding
ENSMUST00000127298 (Ilk-008) 105740511-105741908 protein_coding
ENSMUST00000130565 (Ilk-012) 105741583-105742776 retained_intron
ENSMUST00000136687 (Ilk-004) 105736733-105741043 protein_coding
ENSMUST00000138150 (Ilk-010) 105741781-105742657 processed_transcript
ENSMUST00000145123 (Ilk-006) 105737101-105741361 retained_intron
ENSMUST00000148971 (Ilk-007) 105740188-105741764 retained_intron
ENSMUST00000149695 (Ilk-002) 105736671-105742918 retained_intron
ENSMUST00000151108 (Ilk-009) 105740972-105741910 retained_intron
ENSMUST00000152508 (Ilk-011) 105741182-105742096 retained_intron
ENSMUST00000153557 (Ilk-003) 105740511-105741174 retained_intron
ENSMUST00000154626 (Ilk-005) 105737123-105741475 retained_intron
ENSMUST00000163389 (Ilk-201) 105736725-105742925 protein_coding
ENSMUSG00000043866 (Taf10)
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor 		ENSMUST00000054556 (Taf10-002) 105743237-105744342 retained_intron
ENSMUST00000131683 (Taf10-003) 105742896-105744082 retained_intron
ENSMUST00000141116 (Taf10-001) 105739393-105744361 protein_coding
ENSMUST00000146999 (Taf10-004) 105742906-105743610 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001HZ_0001ENSG00000132275ENST00000254605ENST00000526352ENST00000530762ENST00000533907ENST00000534343ENSG00000166333ENST00000299421ENST00000396751ENST00000420936ENST00000524735ENST00000526114ENST00000526318ENST00000526711ENST00000527121ENST00000528784ENST00000528995ENST00000530016ENST00000532063ENST00000534565ENST00000534706ENST00000537806ENSG00000166337ENST00000299424ENST00000527248ENST00000531760ENST00000532344ENST00000616342CIL_0001HZ_0002ENSMUSG00000030888ENSMUST00000033179ENSMUST00000098148ENSMUST00000127738ENSMUST00000137902ENSMUST00000148176ENSMUST00000154852ENSMUSG00000030890ENSMUST00000033182ENSMUST00000127298ENSMUST00000130565ENSMUST00000136687ENSMUST00000138150ENSMUST00000145123ENSMUST00000148971ENSMUST00000149695ENSMUST00000151108ENSMUST00000152508ENSMUST00000153557ENSMUST00000154626ENSMUST00000163389ENSMUSG00000043866ENSMUST00000054556ENSMUST00000131683ENSMUST00000141116ENSMUST00000146999
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001HZ_0001ENSG00000132275ENST00000254605ENST00000530762ENST00000533907ENST00000534343ENSG00000166333ENST00000299421ENST00000396751ENST00000420936ENST00000527121ENST00000528784ENST00000532063ENSG00000166337ENST00000299424ENST00000527248ENST00000531760ENST00000616342CIL_0001HZ_0002ENSMUSG00000030888ENSMUST00000033179ENSMUSG00000030890ENSMUST00000033182ENSMUST00000127298ENSMUST00000163389ENSMUSG00000043866ENSMUST00000054556ENSMUST00000131683ENSMUST00000141116
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132275 ENST00000254605 1.494±0.00 1.453±0.00 1.426±0.00 1.087±0.38 0.804±0.48 0.920±0.00 0.620±0.03 0.751±0.35 1.067±0.63 0.857±0.00 0.355±0.12 1.032±0.29 0.688±0.27 1.048±0.05
ENST00000526352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530762 4.302±0.00 N/A N/A 1.006±0.00 2.501±0.00 5.287±0.00 2.382±1.31 3.328±1.33 1.956±0.65 2.996±1.80 1.406±0.97 3.353±0.36 3.496±0.52 4.337±0.60
ENST00000533907 N/A N/A N/A N/A 1.423±0.00 1.799±1.06 1.272±0.00 0.500±0.00 1.925±0.00 0.983±0.48 0.803±0.00 3.141±0.48 3.337±2.14 1.060±0.00
ENST00000534343 N/A 5.607±0.00 N/A N/A 3.239±0.00 3.924±0.00 N/A 5.171±0.00 4.347±0.00 3.533±0.00 3.565±0.00 6.397±0.00 5.017±0.06 3.393±0.00
ENSG00000166333 ENST00000299421 N/A N/A N/A N/A 5.949±0.00 N/A 2.126±0.00 N/A 7.017±0.00 N/A N/A N/A N/A N/A
ENST00000396751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.356±0.00 N/A N/A
ENST00000420936 19.763±0.00 26.955±0.00 N/A 2.769±0.00 30.178±0.00 28.885±24.20 13.951±11.50 N/A 7.657±0.00 2.939±0.00 N/A 66.023±0.00 58.122±28.91 30.022±0.00
ENST00000524735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527121 N/A N/A N/A N/A N/A 6.357±0.00 3.415±0.00 N/A 11.316±0.00 4.209±0.00 4.800±0.00 N/A 24.446±0.00 N/A
ENST00000528784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.162±0.00 N/A
ENST00000528995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.306±0.00
ENST00000534565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166337 ENST00000299424 N/A N/A N/A N/A N/A N/A N/A 4.327±0.00 15.705±0.00 4.023±0.00 5.222±0.00 57.223±0.00 N/A N/A
ENST00000527248 N/A N/A N/A 15.738±0.00 N/A N/A N/A N/A 41.312±0.00 N/A 78.783±0.00 N/A N/A N/A
ENST00000531760 N/A N/A N/A N/A N/A N/A N/A N/A 57.797±0.00 N/A N/A 256.346±0.00 N/A 132.478±0.00
ENST00000532344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616342 N/A 6.158±0.00 N/A 3.219±1.78 14.900±0.00 30.991±0.00 12.394±0.00 9.813±0.00 3.680±0.00 12.503±0.00 N/A 8.700±6.49 N/A 9.447±5.80
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030888 ENSMUST00000033179 N/A N/A N/A 5.872±0.00 N/A N/A N/A N/A 9.407±0.00 N/A 5.667±0.59 14.942±0.00 15.833±0.00 N/A
ENSMUST00000098148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030890 ENSMUST00000033182 42.964±9.57 34.949±0.27 76.439±7.32 28.437±5.61 28.425±5.92 17.428±0.00 14.475±1.92 22.690±2.14 17.260±6.11 27.883±6.45 9.930±1.06 44.425±4.14 41.598±14.67 N/A
ENSMUST00000127298 N/A N/A N/A 37.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 112.315±37.66 N/A
ENSMUST00000130565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163389 N/A N/A 44.809±5.14 N/A N/A N/A N/A N/A N/A N/A N/A 61.828±10.51 49.592±2.77 N/A
ENSMUSG00000043866 ENSMUST00000054556 N/A 329.831±85.78 N/A N/A 170.463±69.70 158.792±24.93 N/A 61.044±15.68 60.282±10.38 69.668±25.40 N/A 184.993±17.85 N/A 56.206±3.56
ENSMUST00000131683 111.695±5.08 N/A N/A 67.632±20.12 102.126±7.54 73.325±11.71 45.366±5.04 125.243±20.47 92.650±44.36 56.000±2.69 29.903±2.95 N/A 129.680±10.84 156.806±63.23
ENSMUST00000141116 40.803±9.62 31.281±4.14 19.366±0.00 9.990±3.86 23.795±12.10 23.447±4.25 7.511±2.85 18.971±0.75 10.194±1.49 23.505±7.40 5.080±0.73 36.587±11.56 17.562±7.26 9.430±0.65
ENSMUST00000146999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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