C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7887
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056948 Gm7887-201 ENSMUSG00000044211 10090 - 6:48524372-48525105 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056948
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056948 1.030±0.69 0.773±0.24 0.714±0.40 1.085±0.79 0.638±0.21 0.642±0.16 0.766±0.19 1.128±1.13 0.506±0.18 0.117±0.07 1.116±0.52 0.349±0.15 0.613±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265260 PCNP-001 protein_coding Homo_sapiens 0 905
ENST00000393579 PCNPP3-001 processed_pseudogene Homo_sapiens 0 387
ENST00000452246 PCNPP5-001 processed_pseudogene Homo_sapiens 0 527
ENST00000460231 PCNP-002 nonsense_mediated_decay Homo_sapiens 0 706
ENST00000465366 PCNP-009 retained_intron Homo_sapiens 0 368
ENST00000469941 PCNP-003 protein_coding Homo_sapiens 0 479
ENST00000470490 PCNP-007 processed_transcript Homo_sapiens 0 715
ENST00000486406 PCNP-006 processed_transcript Homo_sapiens 0 368
ENST00000498274 PCNP-005 nonsense_mediated_decay Homo_sapiens 0 708
ENST00000552501 PCNPP1-001 processed_pseudogene Homo_sapiens 0 545

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