C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PEST containing nuclear protein pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393579 PCNPP3-001 ENSG00000213344 9606 - 12:65645992-65646462 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartOvaryPlacentaTestisENST00000393579
Transcript ID Brain Breast Colon Heart Ovary Placenta Testis
ENST00000393579 0.067±0.00 0.065±0.00 0.030±0.00 0.029±0.00 0.368±0.00 0.099±0.00 0.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088X CIL_00088X_0001 VISTA 12:65441147-66043028

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056948 Gm7887-201 processed_pseudogene Mus_musculus 0 387
ENSMUST00000122253 Pcnp-005 protein_coding Mus_musculus 0 387
ENSMUST00000114444 Pcnp-001 protein_coding Mus_musculus 0 387
ENSMUST00000096021 Pcnp-003 protein_coding Mus_musculus 0 339
ENSMUST00000130818 Pcnp-002 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000119981 Pcnp-008 protein_coding Mus_musculus 0 337
ENSMUST00000125040 Pcnp-007 nonsense_mediated_decay Mus_musculus 0 257

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