| Transcript ID | Ovary | Testis |
|---|---|---|
| ENSMUST00000058139 | 2.552±0.00 | 4.130±0.31 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | solute carrier family 38, member 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000058139  |
Slc38a6-002 |
ENSMUSG00000044712 |
10090 | + |
12:73286857-73327878  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008MW | CIL_0008MW_0002 | VISTA | 12:72750612-73352572 |
| CIL_00035S | CIL_00035S_0003 | CGP | 12:73280410-73354049 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000267488
|
SLC38A6-001 | protein_coding | Homo_sapiens | 0 | 259 |
|
ENST00000354886
|
SLC38A6-201 | protein_coding | Homo_sapiens | 0 | 259 |
|
ENST00000451406
|
SLC38A6-003 | protein_coding | Homo_sapiens | 0 | 248 |
|
ENST00000491344
|
SLC38A6-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 285 |
|
ENST00000524402
|
SLC38A6-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 209 |
|
ENST00000525585
|
SLC38A6-007 | retained_intron | Homo_sapiens | 4.00001e-40 | 169 |
|
ENST00000525723
|
SLC38A6-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 207 |
|
ENST00000526105
|
SLC38A6-011 | protein_coding | Homo_sapiens | 5.99756e-43 | 178 |
|
ENST00000527591
|
SLC38A6-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 207 |
|
ENST00000528350
|
SLC38A6-012 | nonsense_mediated_decay | Homo_sapiens | 5.99756e-43 | 178 |
|
ENST00000529345
|
SLC38A6-006 | nonsense_mediated_decay | Homo_sapiens | 1.99965e-42 | 178 |
|
ENST00000532148
|
SLC38A6-009 | processed_transcript | Homo_sapiens | 0 | 259 |
|
ENST00000533744
|
SLC38A6-013 | protein_coding | Homo_sapiens | 5e-34 | 148 |
|
ENST00000534758
|
SLC38A6-008 | protein_coding | Homo_sapiens | 0.000000000009 | 75 |
|
ENST00000554072
|
SLC38A6-016 | retained_intron | Homo_sapiens | 0.000000000007 | 75 |
|
ENST00000554304
|
SLC38A6-019 | processed_transcript | Homo_sapiens | 0 | 259 |
