C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | solute carrier family 38, member 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000451406  |
SLC38A6-003 |
ENSG00000139974 |
9606 | + |
14:60981293-61083729  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006SK | CIL_0006SK_0002 | CGP | 14:60734742-60981358 |
| CIL_00035S | CIL_00035S_0002 | CGP | 14:60971451-61083733 |
| CIL_0006SI | CIL_0006SI_0002 | CGP | 14:60981114-61550976 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006814 | IEA | sodium ion transport |
| GO:0006865 | IEA | amino acid transport |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000140523
|
Slc38a6-001 | protein_coding | Mus_musculus | 0 | 1291 |
|
ENSMUST00000134247
|
Slc38a6-007 | retained_intron | Mus_musculus | 0 | 326 |
|
ENSMUST00000150996
|
Slc38a6-008 | retained_intron | Mus_musculus | 0 | 324 |
|
ENSMUST00000153941
|
Slc38a6-005 | protein_coding | Mus_musculus | 0 | 303 |
|
ENSMUST00000122920
|
Slc38a6-006 | protein_coding | Mus_musculus | 0 | 248 |
|
ENSMUST00000058139
|
Slc38a6-002 | nonsense_mediated_decay | Mus_musculus | 0 | 248 |
|
ENSMUST00000126488
|
Slc38a6-003 | protein_coding | Mus_musculus | 0 | 248 |
|
ENSMUST00000101313
|
Slc38a6-004 | protein_coding | Mus_musculus | 0 | 233 |
