C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: diphthamine biosynthesis 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067955 Dph3-001 ENSMUSG00000021905 10090 - 14:32080569-32085609 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067955 4.680±0.78 3.617±0.68 5.967±0.21 7.233±1.05 3.325±0.50 4.022±0.90 4.489±0.66 4.132±0.75 3.527±1.20 3.961±1.26 3.906±0.51 5.385±0.87 3.048±0.47 2.783±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HN CIL_0004HN_0002 CGP 14:32028989-32085692
CIL_0004HO CIL_0004HO_0002 CGP 14:32080566-32103202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0017183 ISS peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO:0046872 IEA metal ion binding
GO:0050709 ISS negative regulation of protein secretion
GO:0051099 ISS positive regulation of binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217162 TCFL5-201 protein_coding Homo_sapiens 0 279
ENST00000285082 DPH3-003 processed_transcript Homo_sapiens 0 222
ENST00000462982 DPH3-004 processed_transcript Homo_sapiens 0 226
ENST00000486648 DPH3P1-001 processed_pseudogene Homo_sapiens 0 268
ENST00000488423 DPH3-001 protein_coding Homo_sapiens 0 368

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