| Transcript ID | Adrenal | Brain | Liver |
|---|---|---|---|
| ENSMUST00000069968 | 7.227±1.91 | 16.964±3.41 | 2.245±1.97 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PDZ and LIM domain 7 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000069968  |
Pdlim7-002 |
ENSMUSG00000021493 |
10090 | - |
13:55506773-55513438  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008A2 | CIL_0008A2_0002 | VISTA | 13:55104361-55707564 |
| CIL_0002YE | CIL_0002YE_0002 | CGP | 13:55473429-55513676 |
| CIL_0002YF | CIL_0002YF_0002 | CGP | 13:55495795-55528538 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001725 | IDA | stress fiber |
| GO:0001726 | IDA | ruffle |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0030036 | IPI | actin cytoskeleton organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000355572
|
PDLIM7-004 | protein_coding | Homo_sapiens | 0 | 976 |
|
ENST00000355841
|
PDLIM7-001 | protein_coding | Homo_sapiens | 0 | 682 |
|
ENST00000359895
|
PDLIM7-003 | protein_coding | Homo_sapiens | 0 | 355 |
|
ENST00000393546
|
PDLIM7-012 | protein_coding | Homo_sapiens | 0 | 370 |
|
ENST00000393551
|
PDLIM7-007 | protein_coding | Homo_sapiens | 0 | 684 |
|
ENST00000463411
|
PDLIM7-008 | retained_intron | Homo_sapiens | 0 | 366 |
|
ENST00000486828
|
PDLIM7-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 693 |
|
ENST00000493815
|
PDLIM7-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 601 |
|
ENST00000505074
|
PDLIM7-015 | protein_coding | Homo_sapiens | 0 | 688 |
|
ENST00000506161
|
PDLIM7-009 | protein_coding | Homo_sapiens | 0 | 614 |
|
ENST00000506537
|
PDLIM7-010 | protein_coding | Homo_sapiens | 0 | 337 |
