C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002YF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196923-ENSG00000146094 CGP 9606 5:177483394-177511274
GeneTranscriptPositionBiotype
ENSG00000146094 (DOK3)
docking protein 3 		ENST00000312943 (DOK3-002) 177501907-177510385 protein_coding
ENST00000357198 (DOK3-001) 177503750-177509857 protein_coding
ENST00000377112 (DOK3-005) 177502088-177510382 protein_coding
ENST00000500323 (DOK3-006) 177502088-177508877 retained_intron
ENST00000501403 (DOK3-003) 177503784-177510382 protein_coding
ENST00000502380 (DOK3-004) 177508784-177510382 retained_intron
ENST00000502885 (DOK3-012) 177505051-177509826 protein_coding
ENST00000506493 (DOK3-010) 177505013-177509829 protein_coding
ENST00000509310 (DOK3-007) 177508478-177511274 protein_coding
ENST00000510380 (DOK3-011) 177504747-177509846 protein_coding
ENST00000510389 (DOK3-008) 177509502-177511267 protein_coding
ENST00000510898 (DOK3-009) 177508354-177509852 protein_coding
ENST00000512660 (DOK3-013) 177509166-177509826 retained_intron
ENSG00000196923 (PDLIM7)
PDZ and LIM domain 7 (enigma) 		ENST00000355572 (PDLIM7-004) 177490246-177497573 protein_coding
ENST00000355841 (PDLIM7-001) 177483396-177497583 protein_coding
ENST00000359895 (PDLIM7-003) 177483394-177497561 protein_coding
ENST00000393546 (PDLIM7-012) 177491010-177497601 protein_coding
ENST00000393551 (PDLIM7-007) 177487897-177497583 protein_coding
ENST00000463411 (PDLIM7-008) 177491759-177497606 retained_intron
ENST00000486828 (PDLIM7-006) 177483398-177497601 nonsense_mediated_decay
ENST00000493815 (PDLIM7-002) 177483394-177497561 nonsense_mediated_decay
ENST00000503346 (PDLIM7-011) 177491073-177492970 retained_intron
ENST00000503827 (PDLIM7-013) 177491096-177496427 nonsense_mediated_decay
ENST00000504318 (PDLIM7-014) 177491072-177492572 retained_intron
ENST00000504380 (PDLIM7-017) 177483695-177484473 retained_intron
ENST00000505074 (PDLIM7-015) 177489811-177497586 protein_coding
ENST00000505746 (PDLIM7-016) 177483875-177485014 processed_transcript
ENST00000506161 (PDLIM7-009) 177491025-177496831 protein_coding
ENST00000506537 (PDLIM7-010) 177492413-177496877 protein_coding
ENSG00000248996 (RP11-1334A24.6)
 ENST00000506025 (RP11-1334A24.6-001) 177494995-177503647 antisense
CIL_0002YF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021493-ENSMUSG00000035711 CGP 10090 13:55495795-55528538
GeneTranscriptPositionBiotype
ENSMUSG00000021493 (Pdlim7)
PDZ and LIM domain 7 		ENSMUST00000046246 (Pdlim7-001) 55498416-55513446 protein_coding
ENSMUST00000069929 (Pdlim7-003) 55506774-55513434 protein_coding
ENSMUST00000069968 (Pdlim7-002) 55506773-55513438 protein_coding
ENSMUST00000128910 (Pdlim7-005) 55498412-55513437 retained_intron
ENSMUST00000128911 (Pdlim7-011) 55507552-55509020 retained_intron
ENSMUST00000131306 (Pdlim7-007) 55506774-55513438 protein_coding
ENSMUST00000136583 (Pdlim7-010) 55508810-55513421 retained_intron
ENSMUST00000144288 (Pdlim7-008) 55508233-55513676 protein_coding
ENSMUST00000153230 (Pdlim7-006) 55497490-55513434 retained_intron
ENSMUST00000153426 (Pdlim7-009) 55508966-55512709 protein_coding
ENSMUST00000155098 (Pdlim7-004) 55495795-55513438 nonsense_mediated_decay
ENSMUSG00000035711 (Dok3)
docking protein 3 		ENSMUST00000047877 (Dok3-201) 55523235-55528538 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YF_0001ENSG00000146094ENST00000312943ENST00000357198ENST00000377112ENST00000500323ENST00000502380ENST00000502885ENST00000510389ENST00000510898ENSG00000196923ENST00000355572ENST00000355841ENST00000359895ENST00000393546ENST00000486828ENST00000493815ENST00000504380ENST00000505074ENST00000506161ENSG00000248996ENST00000506025CIL_0002YF_0002ENSMUSG00000021493ENSMUST00000046246ENSMUST00000069929ENSMUST00000069968ENSMUST00000128910ENSMUST00000131306ENSMUST00000136583ENSMUST00000153230ENSMUSG00000035711ENSMUST00000047877
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146094 ENST00000312943 N/A 13.940±0.00 N/A N/A N/A 0.447±0.00 N/A N/A N/A N/A 0.038±0.00 1.994±0.00 N/A 1.149±0.00
ENST00000357198 1.370±0.00 9.251±0.00 N/A N/A N/A N/A 0.336±0.00 N/A 0.262±0.00 N/A 0.155±0.00 1.329±0.00 N/A 1.067±0.00
ENST00000377112 N/A N/A N/A 0.683±0.00 N/A N/A 0.454±0.00 0.488±0.00 N/A N/A 0.582±0.00 N/A N/A N/A
ENST00000500323 N/A 5.952±0.00 N/A N/A 0.212±0.00 N/A 0.174±0.06 N/A 0.154±0.00 1.775±0.00 N/A 0.174±0.00 N/A 0.522±0.00
ENST00000501403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502380 N/A N/A N/A 0.204±0.00 N/A N/A N/A 0.273±0.00 N/A N/A N/A 0.254±0.00 N/A N/A
ENST00000502885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.420±0.00 N/A N/A
ENST00000506493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510389 N/A N/A N/A 0.295±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510898 N/A N/A N/A N/A N/A N/A N/A 0.627±0.00 1.399±0.00 1.599±0.00 N/A 1.094±0.00 N/A N/A
ENST00000512660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196923 ENST00000355572 N/A N/A 0.611±0.00 8.403±0.00 N/A N/A 3.140±2.77 N/A 0.812±0.00 N/A 19.136±7.35 14.001±0.00 N/A 10.887±0.00
ENST00000355841 24.434±0.00 51.949±0.00 0.515±0.00 N/A 23.622±0.00 83.821±0.00 2.320±0.00 8.912±8.59 2.183±0.00 23.023±0.00 N/A 60.342±47.57 39.444±19.89 46.489±41.74
ENST00000359895 N/A 29.986±0.00 N/A 3.068±0.00 3.746±2.26 18.341±14.95 2.506±0.00 N/A 9.594±0.00 N/A N/A 43.107±0.00 10.537±0.00 N/A
ENST00000393546 N/A N/A 1.157±0.00 N/A 5.979±0.00 8.116±0.00 1.168±0.00 N/A N/A 2.914±0.00 29.734±0.00 N/A 24.459±0.00 N/A
ENST00000393551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486828 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 N/A 0.445±0.00 N/A N/A
ENST00000493815 N/A N/A N/A N/A N/A N/A N/A N/A 0.437±0.00 9.670±0.00 6.826±0.00 N/A N/A N/A
ENST00000503346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.866±5.27 N/A 8.520±0.00
ENST00000505074 N/A N/A N/A N/A N/A N/A 0.249±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000505746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.372±0.00 N/A N/A
ENST00000506537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248996 ENST00000506025 N/A N/A N/A N/A 1.182±0.00 N/A N/A N/A N/A N/A 0.395±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021493 ENSMUST00000046246 34.361±14.89 7.963±1.41 90.829±0.87 5.032±0.19 16.398±4.18 46.679±5.84 5.427±0.18 5.295±0.75 4.792±3.38 15.117±1.33 N/A 38.855±17.43 35.716±15.72 1.443±0.47
ENSMUST00000069929 N/A N/A 64.245±9.55 11.932±0.00 78.216±50.11 N/A 28.773±6.73 N/A N/A N/A 274.800±9.95 N/A N/A 1.628±0.26
ENSMUST00000069968 N/A 7.227±1.91 N/A 16.964±3.41 N/A N/A N/A N/A 2.245±1.97 N/A N/A N/A N/A N/A
ENSMUST00000128910 N/A N/A N/A N/A N/A N/A N/A N/A 0.678±0.00 6.464±0.00 N/A 5.638±0.00 N/A N/A
ENSMUST00000128911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131306 N/A N/A N/A 7.843±3.65 4.440±0.00 N/A 3.086±0.30 N/A N/A N/A N/A 13.475±1.59 N/A 0.839±0.04
ENSMUST00000136583 N/A N/A N/A 49.198±0.00 N/A N/A N/A N/A N/A N/A N/A 31.189±0.00 30.027±0.00 N/A
ENSMUST00000144288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153230 17.764±9.88 3.618±0.63 26.795±1.32 3.368±1.45 9.875±2.81 14.941±2.16 4.136±0.02 2.230±0.31 1.246±0.72 8.218±0.49 N/A 19.986±9.60 6.667±3.42 0.985±0.19
ENSMUST00000153426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035711 ENSMUST00000047877 4.334±1.21 5.479±0.35 3.011±0.66 5.012±1.90 38.647±15.54 5.924±1.44 2.026±1.22 2.173±0.42 4.364±4.08 13.917±0.70 1.023±0.84 3.436±1.35 1.120±0.44 0.591±0.15

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