| Transcript ID | Liver | Lung | Muscle |
|---|---|---|---|
| ENST00000493815 | 0.437±0.00 | 9.670±0.00 | 6.826±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PDZ and LIM domain 7 (enigma) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000493815  |
PDLIM7-002 |
ENSG00000196923 |
9606 | - |
5:177483394-177497561  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008A2 | CIL_0008A2_0001 | VISTA | 5:177089375-177692188 |
| CIL_0002YE | CIL_0002YE_0001 | CGP | 5:177456608-177497606 |
| CIL_0002YF | CIL_0002YF_0001 | CGP | 5:177483394-177511274 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001503 | IEA | ossification |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005925 | IDA | focal adhesion |
| GO:0006898 | TAS | receptor-mediated endocytosis |
| GO:0007275 | IEA | multicellular organismal development |
| GO:0008270 | IEA | zinc ion binding |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0030154 | IEA | cell differentiation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000046246
|
Pdlim7-001 | protein_coding | Mus_musculus | 0 | 1607 |
|
ENSMUST00000155098
|
Pdlim7-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1607 |
|
ENSMUST00000128910
|
Pdlim7-005 | retained_intron | Mus_musculus | 0 | 1048 |
|
ENSMUST00000153230
|
Pdlim7-006 | retained_intron | Mus_musculus | 0 | 1011 |
|
ENSMUST00000069968
|
Pdlim7-002 | protein_coding | Mus_musculus | 0 | 601 |
|
ENSMUST00000131306
|
Pdlim7-007 | protein_coding | Mus_musculus | 0 | 468 |
|
ENSMUST00000144288
|
Pdlim7-008 | protein_coding | Mus_musculus | 0 | 431 |
|
ENSMUST00000069929
|
Pdlim7-003 | protein_coding | Mus_musculus | 0 | 351 |
|
ENSMUST00000136583
|
Pdlim7-010 | retained_intron | Mus_musculus | 0 | 311 |
|
ENSMUST00000153426
|
Pdlim7-009 | protein_coding | Mus_musculus | 0 | 198 |
