C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10A, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071184 Rpl10a-ps2-001 ENSMUSG00000061988 10090 - 13:8940336-8940977 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverOvaryPlacentaTestisENSMUST00000071184
Transcript ID Adipose Bladder Brain Breast Heart Liver Ovary Placenta Testis
ENSMUST00000071184 0.064±0.00 0.076±0.00 0.010±0.00 0.178±0.00 0.123±0.06 0.027±0.02 0.136±0.07 0.018±0.01 0.065±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000136547 rpl10a-002 processed_transcript Danio_rerio 0 433
ENSDART00000062983 rpl10a-001 protein_coding Danio_rerio 0 433
ENSDART00000138427 rpl10a-004 nonsense_mediated_decay Danio_rerio 0.000000000002 77
ENSDART00000141110 rpl10a-003 retained_intron Danio_rerio 0.000000000002 77
ENST00000322203 RPL10A-001 protein_coding Homo_sapiens 0 634
ENST00000462503 RPL10AP3-001 processed_pseudogene Homo_sapiens 0 486
ENST00000464112 RPL10A-002 processed_transcript Homo_sapiens 0 628
ENST00000467020 RPL10A-005 processed_transcript Homo_sapiens 0 499
ENST00000472730 RPL10AP6-001 processed_pseudogene Homo_sapiens 0 593
ENST00000478340 RPL10A-004 processed_transcript Homo_sapiens 0 499
ENST00000479243 RPL10AP2-001 processed_pseudogene Homo_sapiens 0 584
ENST00000484096 RP11-568J23.1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000486625 CTD-2161E19.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000490023 RPL10AP1-001 processed_pseudogene Homo_sapiens 0 492
ENST00000490335 RPL10A-003 processed_transcript Homo_sapiens 0 401

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