C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L10a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478340 RPL10A-004 ENSG00000198755 9606 + 6:35468420-35470785 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0001 VISTA 6:35189352-35792826
CIL_0002L9 CIL_0002L9_0002 CGP 6:35452361-35470785
CIL_0002EP CIL_0002EP_0001 CGP 6:35468408-35497076

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129935 Rpl10a-002 nonsense_mediated_decay Mus_musculus 0 974
ENSMUST00000120360 Rpl10a-ps1-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000042334 Rpl10a-001 protein_coding Mus_musculus 0 568
ENSMUST00000143443 Rpl10a-004 retained_intron Mus_musculus 0 566
ENSMUST00000071184 Rpl10a-ps2-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000116410 Gm13573-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000128758 Rpl10a-006 retained_intron Mus_musculus 0 433
ENSMUST00000150103 Rpl10a-005 retained_intron Mus_musculus 0 416
ENSMUST00000141049 Rpl10a-007 retained_intron Mus_musculus 0 398
ENSMUST00000152665 Rpl10a-003 retained_intron Mus_musculus 0 244
ENSDART00000138427 rpl10a-004 nonsense_mediated_decay Danio_rerio 0.000000008 66
ENSDART00000141110 rpl10a-003 retained_intron Danio_rerio 0.000000008 66

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