C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: misshapen-like kinase 1 (zebrafish)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072237 Mink1-201 ENSMUSG00000020827 10090 + 11:70562881-70614482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000072237
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000072237 2.029±0.00 6.962±1.99 12.456±1.41 10.405±2.54 6.262±0.00 3.010±0.99 10.088±0.67 7.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RG CIL_0001RG_0002 CGP 11:70540064-70614483
CIL_0001R8 CIL_0001R8_0002 CGP 11:70562881-70619216

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001952 IEA regulation of cell-matrix adhesion
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0022407 IEA regulation of cell-cell adhesion
GO:0030334 IEA regulation of cell migration
GO:0031532 IEA actin cytoskeleton reorganization
GO:0045060 IMP negative thymic T cell selection
GO:0046330 IEA positive regulation of JNK cascade
GO:0046777 IEA protein autophosphorylation
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051234 tnika-001 protein_coding Danio_rerio 0 662
ENSDART00000097792 tnikb-201 protein_coding Danio_rerio 0 651
ENSDART00000008374 tnikb-002 protein_coding Danio_rerio 0 634
ENSDART00000138089 tnikb-003 processed_transcript Danio_rerio 0 276
ENST00000293780 CHRNE-001 protein_coding Homo_sapiens 0 219
ENST00000347992 MINK1-002 protein_coding Homo_sapiens 0 3096
ENST00000355280 MINK1-001 protein_coding Homo_sapiens 0 6061
ENST00000453408 MINK1-003 protein_coding Homo_sapiens 0 2802
ENST00000571207 MINK1-006 nonsense_mediated_decay Homo_sapiens 0 3101
ENST00000572304 MINK1-012 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000572330 MINK1-004 retained_intron Homo_sapiens 0 2929
ENST00000572629 MINK1-010 retained_intron Homo_sapiens 0 289
ENST00000574453 MINK1-005 nonsense_mediated_decay Homo_sapiens 0 2944
ENST00000574871 MINK1-008 retained_intron Homo_sapiens 0 830
ENST00000575511 MINK1-013 retained_intron Homo_sapiens 0 514
ENST00000576037 MINK1-014 protein_coding Homo_sapiens 0 649
ENST00000577021 MINK1-009 nonsense_mediated_decay Homo_sapiens 0 826

Loading