C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF2 and NCK interacting kinase a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000051234 tnika-001 ENSDARG00000056218 7955 + 2:25806282-25964659 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000051234
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000051234 7.781±2.64 1.234±0.56 1.204±0.51 0.099±0.00 0.632±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070U CIL_00070U_0001 CGP 2:25708726-25964659
CIL_000710 CIL_000710_0001 CGP 2:25806282-25986156

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0006468 IEA protein phosphorylation
GO:0007369 IMP gastrulation
GO:0008360 IMP regulation of cell shape
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016740 IEA transferase activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0060027 IMP convergent extension involved in gastrulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072237 Mink1-201 protein_coding Mus_musculus 0 662
ENSMUST00000072873 Mink1-006 protein_coding Mus_musculus 0 662
ENSMUST00000079244 Mink1-003 protein_coding Mus_musculus 0 662
ENSMUST00000102558 Mink1-005 protein_coding Mus_musculus 0 662
ENSMUST00000102559 Mink1-007 protein_coding Mus_musculus 0 662
ENSMUST00000136663 Mink1-004 protein_coding Mus_musculus 0 662
ENST00000347992 MINK1-002 protein_coding Homo_sapiens 0 654
ENST00000355280 MINK1-001 protein_coding Homo_sapiens 0 654
ENST00000453408 MINK1-003 protein_coding Homo_sapiens 0 654
ENST00000571207 MINK1-006 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000572330 MINK1-004 retained_intron Homo_sapiens 0 654
ENST00000574453 MINK1-005 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000574871 MINK1-008 retained_intron Homo_sapiens 0 372
ENST00000576037 MINK1-014 protein_coding Homo_sapiens 0 300

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