C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: misshapen-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574453 MINK1-005 ENSG00000141503 9606 + 17:4833413-4898053 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000574453
Transcript ID Ovary
ENST00000574453 4.822±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RG CIL_0001RG_0001 CGP 17:4807096-4898061
CIL_0001R8 CIL_0001R8_0001 CGP 17:4833388-4903074

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102559 Mink1-007 protein_coding Mus_musculus 0 5670
ENSMUST00000102558 Mink1-005 protein_coding Mus_musculus 0 5094
ENSMUST00000079244 Mink1-003 protein_coding Mus_musculus 0 3073
ENSMUST00000072237 Mink1-201 protein_coding Mus_musculus 0 2944
ENSMUST00000136663 Mink1-004 protein_coding Mus_musculus 0 2944
ENSMUST00000072873 Mink1-006 protein_coding Mus_musculus 0 2828
ENSMUST00000133310 Mink1-002 processed_transcript Mus_musculus 0 809
ENSDART00000131488 MAP4K4-201 protein_coding Danio_rerio 0 747
ENSMUST00000163854 Map4k4-201 protein_coding Mus_musculus 0 730
ENSMUST00000168431 Map4k4-202 protein_coding Mus_musculus 0 730
ENSDART00000051234 tnika-001 protein_coding Danio_rerio 0 654
ENSMUST00000153503 Mink1-011 retained_intron Mus_musculus 0 553
ENSMUST00000178764 Mink1-013 protein_coding Mus_musculus 0 472
ENSMUST00000132208 Mink1-008 retained_intron Mus_musculus 0 444
ENSMUST00000142650 Mink1-009 retained_intron Mus_musculus 0 444
ENSMUST00000152857 Mink1-010 retained_intron Mus_musculus 0 375
ENSMUST00000149845 Mink1-001 nonsense_mediated_decay Mus_musculus 0 322

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