C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine-rich hydrophobic domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075452 Chic2-001 ENSMUSG00000029229 10090 - 5:75001026-75044774 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075452
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075452 1.596±0.27 6.665±2.65 1.956±0.10 2.557±1.48 3.792±2.21 5.718±0.68 0.906±0.08 1.292±0.11 1.615±0.48 5.030±1.39 0.853±0.04 5.682±2.32 2.175±0.71 3.217±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CM CIL_0001CM_0002 CGP 5:74592446-75044774
CIL_0007R1 CIL_0007R1_0002 VISTA 5:74712461-75313668
CIL_0008IT CIL_0008IT_0002 VISTA 5:74771388-75372201
CIL_0007J9 CIL_0007J9_0002 UCNEbase 5:74999213-75071992
CIL_0001CN CIL_0001CN_0002 CGP 5:75001026-75077893

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005794 IDA Golgi apparatus
GO:0005798 IDA Golgi-associated vesicle
GO:0005886 IDA plasma membrane
GO:0006893 TAS Golgi to plasma membrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263921 CHIC2-001 protein_coding Homo_sapiens 0 1314
ENST00000509678 CHIC2-004 retained_intron Homo_sapiens 0 520
ENST00000510894 CHIC2-005 protein_coding Homo_sapiens 0 455
ENST00000512964 CHIC2-003 protein_coding Homo_sapiens 0 527
ENST00000611416 CYP20A1-201 protein_coding Homo_sapiens 0.0000000002 75

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