C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001CN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109220-ENSG00000180613 CGP 9606 4:54009789-54102505
GeneTranscriptPositionBiotype
ENSG00000109220 (CHIC2)
cysteine-rich hydrophobic domain 2 		ENST00000263921 (CHIC2-001) 54009789-54064690 protein_coding
ENST00000509678 (CHIC2-004) 54048831-54064308 retained_intron
ENST00000510894 (CHIC2-005) 54009979-54064298 protein_coding
ENST00000512964 (CHIC2-003) 54009825-54064300 protein_coding
ENSG00000180613 (GSX2)
GS homeobox 2 		ENST00000326902 (GSX2-001) 54100031-54102505 protein_coding
ENST00000503800 (GSX2-002) 54100173-54102227 protein_coding
ENST00000507839 (GSX2-004) 54099523-54101928 processed_transcript
ENST00000548609 (GSX2-003) 54100816-54102146 processed_transcript
ENST00000611459 (GSX2-201) 54100031-54101955 protein_coding
ENSG00000250147 (MORF4L2P1)
mortality factor 4 like 2 pseudogene 1 		ENST00000503761 (MORF4L2P1-001) 54086926-54087783 processed_pseudogene
ENSG00000251105 (RP11-571I18.2)
 ENST00000510278 (RP11-571I18.2-001) 54076625-54076848 processed_pseudogene
ENSG00000269506 (RP11-571I18.5)
 ENST00000595906 (RP11-571I18.5-001) 54059597-54061210 antisense
CIL_0001CN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029229-ENSMUSG00000035946 CGP 10090 5:75001026-75077893
GeneTranscriptPositionBiotype
ENSMUSG00000029229 (Chic2)
cysteine-rich hydrophobic domain 2 		ENSMUST00000075452 (Chic2-001) 75001026-75044774 protein_coding
ENSMUST00000162397 (Chic2-002) 75011180-75011509 retained_intron
ENSMUSG00000035946 (Gsx2)
GS homeobox 2 		ENSMUST00000040477 (Gsx2-001) 75075601-75077893 protein_coding
ENSMUST00000160104 (Gsx2-002) 75075464-75077625 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CN_0001ENSG00000109220ENST00000263921ENST00000509678ENST00000510894ENST00000512964ENSG00000180613ENST00000326902ENST00000503800ENST00000507839ENST00000548609ENST00000611459ENSG00000250147ENST00000503761ENSG00000251105ENST00000510278ENSG00000269506ENST00000595906CIL_0001CN_0002ENSMUSG00000029229ENSMUST00000075452ENSMUST00000162397ENSMUSG00000035946ENSMUST00000040477ENSMUST00000160104
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CN_0001ENSG00000109220ENST00000263921ENST00000510894ENSG00000180613ENST00000326902ENST00000503800ENST00000507839ENST00000548609ENSG00000250147ENST00000503761ENSG00000251105ENST00000510278ENSG00000269506ENST00000595906CIL_0001CN_0002ENSMUSG00000029229ENSMUST00000075452ENSMUST00000162397ENSMUSG00000035946ENSMUST00000040477ENSMUST00000160104
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109220 ENST00000263921 4.275±0.00 5.917±0.00 1.141±0.00 1.166±0.00 3.135±0.70 3.049±1.68 1.730±0.61 2.759±0.02 2.911±0.83 7.238±0.00 1.574±0.96 5.525±0.21 12.574±7.19 22.235±4.23
ENST00000509678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510894 N/A N/A N/A N/A 2.169±0.00 2.283±0.00 N/A 3.371±0.00 1.490±0.00 6.782±0.00 N/A 3.078±1.01 2.146±0.00 10.830±0.00
ENST00000512964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180613 ENST00000326902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A
ENST00000503800 N/A N/A N/A 0.103±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.00
ENST00000507839 N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A 0.451±0.00 N/A N/A N/A N/A
ENST00000548609 N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A 0.277±0.00
ENST00000611459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250147 ENST00000503761 N/A 0.032±0.00 N/A 0.033±0.00 N/A 0.015±0.00 0.015±0.00 N/A N/A N/A N/A N/A N/A 0.047±0.00
ENSG00000251105 ENST00000510278 N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000269506 ENST00000595906 0.042±0.00 0.154±0.00 1.946±0.00 0.041±0.02 0.557±0.51 0.969±0.00 0.166±0.16 0.222±0.19 0.569±0.00 0.854±0.82 0.073±0.00 0.230±0.30 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029229 ENSMUST00000075452 1.596±0.27 6.665±2.65 1.956±0.10 2.557±1.48 3.792±2.21 5.718±0.68 0.906±0.08 1.292±0.11 1.615±0.48 5.030±1.39 0.853±0.04 5.682±2.32 2.175±0.71 3.217±0.97
ENSMUST00000162397 N/A N/A N/A 101.885±0.00 N/A N/A N/A N/A N/A N/A N/A 300.921±0.00 517.295±51.17 472.670±0.00
ENSMUSG00000035946 ENSMUST00000040477 N/A N/A N/A 1.260±0.90 N/A N/A N/A N/A 0.004±0.00 N/A N/A 0.112±0.06 0.055±0.03 N/A
ENSMUST00000160104 N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A 0.086±0.03 0.014±0.00 N/A

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