C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077856 Rpl27-001 ENSMUSG00000063316 10090 + 11:101442298-101445529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077856
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077856 77.183±17.63 42.591±5.45 421.284±48.93 237.480±173.27 90.000±17.65 119.174±29.42 68.786±13.32 140.230±14.51 369.445±316.09 82.480±10.63 179.637±14.44 144.169±95.06 245.104±170.56 48.244±20.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253788 RPL27-001 protein_coding Homo_sapiens 0 590
ENST00000411843 AC096664.1-001 processed_pseudogene Homo_sapiens 0 446
ENST00000425821 RP4-604A21.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000427253 AC009362.2-001 processed_pseudogene Homo_sapiens 0 448
ENST00000441321 AC016691.2-001 processed_pseudogene Homo_sapiens 0 368
ENST00000468034 RP11-829H16.2-001 processed_pseudogene Homo_sapiens 0 424
ENST00000477507 CTD-2186M15.1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000586277 RPL27-006 protein_coding Homo_sapiens 0 438
ENST00000588830 RPL27-007 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000589037 RPL27-004 protein_coding Homo_sapiens 0 556
ENST00000589913 RPL27-003 protein_coding Homo_sapiens 0 538
ENST00000590864 RPL27-008 protein_coding Homo_sapiens 0 438
ENST00000593262 RPL27-002 retained_intron Homo_sapiens 0 438

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