C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shal-related family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079169 Kcnd3-201 ENSMUSG00000040896 10090 + 3:105458782-105669309 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000079169
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000079169 2.832±2.73 0.951±0.41 3.748±1.27 0.111±0.04 2.711±0.30 2.143±0.25 1.353±0.28 0.022±0.01 0.463±0.07 0.020±0.00 9.348±1.20 1.098±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075Y CIL_00075Y_0002 CGP 3:105452330-105687574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005250 IBA A-type (transient outward) potassium channel activity
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000042673 kcnd2-201 protein_coding Danio_rerio 0 752
ENSDART00000138890 kcnd2-001 protein_coding Danio_rerio 0 752
ENST00000218176 KCND1-001 protein_coding Homo_sapiens 0 630
ENST00000302127 KCND3-201 protein_coding Homo_sapiens 0 1967
ENST00000315987 KCND3-001 protein_coding Homo_sapiens 0 2830
ENST00000369697 KCND3-002 protein_coding Homo_sapiens 0 1967

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