C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shal-related subfamily, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000138890 kcnd2-001 ENSDARG00000032799 7955 + 4:9430381-9623992 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000138890
Transcript ID Heart Kidney Muscle
ENSDART00000138890 0.015±0.00 0.038±0.00 0.715±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U7 CIL_0005U7_0001 CGP 4:9430381-9663586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005250 IBA A-type (transient outward) potassium channel activity
GO:0005267 IEA potassium channel activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IBA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079169 Kcnd3-201 protein_coding Mus_musculus 0 752
ENSMUST00000081542 Kcnd2-001 protein_coding Mus_musculus 0 660
ENSMUST00000098761 Kcnd3-002 protein_coding Mus_musculus 0 752
ENSMUST00000118360 Kcnd3-001 protein_coding Mus_musculus 0 752
ENSMUST00000141694 Kcnd3-003 retained_intron Mus_musculus 0 752
ENST00000302127 KCND3-201 protein_coding Homo_sapiens 0 869
ENST00000315987 KCND3-001 protein_coding Homo_sapiens 0 869
ENST00000369697 KCND3-002 protein_coding Homo_sapiens 0 869

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