C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: misshapen-like kinase 1 (zebrafish)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079244 Mink1-003 ENSMUSG00000020827 10090 + 11:70563017-70614483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverLungOvaryPlacentaENSMUST00000079244
Transcript ID Kidney Liver Lung Ovary Placenta
ENSMUST00000079244 4.565±1.37 1.846±0.47 7.700±0.00 6.453±0.00 2.437±1.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RG CIL_0001RG_0002 CGP 11:70540064-70614483
CIL_0001R8 CIL_0001R8_0002 CGP 11:70562881-70619216

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0045060 IMP negative thymic T cell selection
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051234 tnika-001 protein_coding Danio_rerio 0 662
ENSDART00000097792 tnikb-201 protein_coding Danio_rerio 0 651
ENSDART00000008374 tnikb-002 protein_coding Danio_rerio 0 634
ENSDART00000138089 tnikb-003 processed_transcript Danio_rerio 0 276
ENST00000293780 CHRNE-001 protein_coding Homo_sapiens 0 220
ENST00000347992 MINK1-002 protein_coding Homo_sapiens 0 2964
ENST00000355280 MINK1-001 protein_coding Homo_sapiens 0 6011
ENST00000453408 MINK1-003 protein_coding Homo_sapiens 0 2931
ENST00000571207 MINK1-006 nonsense_mediated_decay Homo_sapiens 0 2972
ENST00000572304 MINK1-012 retained_intron Homo_sapiens 5.99756e-43 178
ENST00000572330 MINK1-004 retained_intron Homo_sapiens 0 2798
ENST00000572629 MINK1-010 retained_intron Homo_sapiens 0 291
ENST00000574453 MINK1-005 nonsense_mediated_decay Homo_sapiens 0 3073
ENST00000574871 MINK1-008 retained_intron Homo_sapiens 0 830
ENST00000575511 MINK1-013 retained_intron Homo_sapiens 0 514
ENST00000576037 MINK1-014 protein_coding Homo_sapiens 0 649
ENST00000577021 MINK1-009 nonsense_mediated_decay Homo_sapiens 0 826

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