C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TraB domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081702 Trabd-001 ENSMUSG00000015363 10090 + 15:89076013-89087077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081702 11.934±1.67 9.549±2.32 11.682±1.32 8.119±0.69 13.504±1.43 20.054±3.39 15.456±1.27 17.057±3.47 15.648±7.71 14.583±3.11 11.267±1.14 12.117±3.90 9.207±3.40 4.513±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GZ CIL_0000GZ_0002 CGP 15:89059734-89087077
CIL_000098 CIL_000098_0002 CGP 15:89075124-89100340

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303434 TRABD-001 protein_coding Homo_sapiens 0 1232
ENST00000380909 TRABD-003 protein_coding Homo_sapiens 0 1280
ENST00000395827 TRABD-004 protein_coding Homo_sapiens 0 1232
ENST00000395829 TRABD-005 protein_coding Homo_sapiens 0 1232
ENST00000463233 TRABD-002 retained_intron Homo_sapiens 0 918
ENST00000472677 TRABD-006 retained_intron Homo_sapiens 0 318

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