C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XV, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082303 Col15a1-002 ENSMUSG00000028339 10090 + 4:47208161-47313163 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryTestisENSMUST00000082303
Transcript ID Adrenal Breast Colon Lung Ovary Testis
ENSMUST00000082303 11.422±2.01 16.766±10.02 3.281±0.00 1.792±0.00 14.235±3.84 0.425±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000200 CIL_000200_0002 CGP 4:47091909-47313167
CIL_0007BK CIL_0007BK_0003 CGP 4:47208161-47414931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005581 IEA collagen trimer
GO:0005604 IDA basement membrane
GO:0007155 IEA cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375001 COL15A1-001 protein_coding Homo_sapiens 0 1855
ENST00000610452 COL15A1-201 protein_coding Homo_sapiens 0 1855

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