C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L27, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088784 Rpl27-ps1-201 ENSMUSG00000079137 10090 - 1:171305084-171305494 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088784
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088784 0.395±0.01 0.432±0.07 0.330±0.21 0.201±0.00 0.338±0.04 0.180±0.09 0.305±0.11 0.321±0.21 0.702±0.40 0.491±0.15 1.215±0.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253788 RPL27-001 protein_coding Homo_sapiens 0 505
ENST00000411843 AC096664.1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000425821 RP4-604A21.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000427253 AC009362.2-001 processed_pseudogene Homo_sapiens 0 448
ENST00000441321 AC016691.2-001 processed_pseudogene Homo_sapiens 0 339
ENST00000468034 RP11-829H16.2-001 processed_pseudogene Homo_sapiens 0 412
ENST00000477507 CTD-2186M15.1-001 processed_pseudogene Homo_sapiens 0 403
ENST00000586277 RPL27-006 protein_coding Homo_sapiens 0 399
ENST00000588830 RPL27-007 nonsense_mediated_decay Homo_sapiens 1.4013e-45 185
ENST00000589037 RPL27-004 protein_coding Homo_sapiens 0 505
ENST00000589913 RPL27-003 protein_coding Homo_sapiens 0 505
ENST00000590864 RPL27-008 protein_coding Homo_sapiens 0 398
ENST00000593262 RPL27-002 retained_intron Homo_sapiens 0 398

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