C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tachykinin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090679 Tac1-004 ENSMUSG00000061762 10090 + 6:7555074-7562976 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverMuscleOvaryPlacentaENSMUST00000090679
Transcript ID Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000090679 0.056±0.00 7.837±1.52 0.176±0.10 4.288±1.25 0.313±0.22 0.043±0.04 0.085±0.00 0.554±0.27 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BH CIL_0003BH_0003 CGP 6:6956004-7565834
CIL_0005L4 CIL_0005L4_0003 CGP 6:7554879-7693254

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319273 TAC1-001 protein_coding Homo_sapiens 0 448
ENST00000346867 TAC1-002 protein_coding Homo_sapiens 0 520
ENST00000350485 TAC1-003 protein_coding Homo_sapiens 0 701
ENST00000491437 TAC1-005 retained_intron Homo_sapiens 8e-27 124

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