| Transcript ID | Brain | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENSMUST00000094551 | 2.494±0.00 | 6.167±0.00 | 2.396±0.92 | 0.660±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SRY (sex determining region Y)-box 13 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000094551  |
Sox13-201 |
ENSMUSG00000070643 |
10090 | - |
1:133383651-133393270  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W2 | CIL_0008W2_0002 | VISTA | 1:133249313-133850886 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0043565 | IDA | sequence-specific DNA binding |
| GO:0045586 | IDA | regulation of gamma-delta T cell differentiation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000272193
|
SOX13-004 | processed_transcript | Homo_sapiens | 0 | 1816 |
|
ENST00000367203
|
SOX13-001 | processed_transcript | Homo_sapiens | 0 | 769 |
|
ENST00000367204
|
SOX13-002 | protein_coding | Homo_sapiens | 0 | 2085 |
|
ENST00000480326
|
SOX13-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 494 |
|
ENST00000525258
|
SOX13-009 | retained_intron | Homo_sapiens | 0 | 374 |
|
ENST00000525442
|
SOX13-007 | protein_coding | Homo_sapiens | 1.99993e-41 | 172 |
|
ENST00000528591
|
SOX13-008 | protein_coding | Homo_sapiens | 0 | 422 |
|
ENST00000534185
|
SOX13-005 | processed_transcript | Homo_sapiens | 9.99995e-41 | 171 |
|
ENST00000618875
|
SOX13-201 | protein_coding | Homo_sapiens | 0 | 2085 |
