C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095045 St6galnac6-202 ENSMUSG00000026811 10090 + 2:32599780-32620804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000095045
Transcript ID Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000095045 2.807±1.65 5.398±0.00 275.835±6.35 2.222±0.00 7.264±2.89 4.681±1.12 0.546±0.15 1.242±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001574 IDA ganglioside biosynthetic process
GO:0001665 IDA alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0097503 IDA:IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263671 CHRDL2-001 protein_coding Homo_sapiens 0.0001 53
ENST00000291839 ST6GALNAC6-201 protein_coding Homo_sapiens 0 1441
ENST00000373141 ST6GALNAC6-010 protein_coding Homo_sapiens 0 1445
ENST00000373142 ST6GALNAC6-006 protein_coding Homo_sapiens 0 1415
ENST00000373144 ST6GALNAC6-008 protein_coding Homo_sapiens 0 1445
ENST00000373146 ST6GALNAC6-007 protein_coding Homo_sapiens 0 1441
ENST00000447681 ST6GALNAC6-011 protein_coding Homo_sapiens 0 846
ENST00000463086 ST6GALNAC6-014 processed_transcript Homo_sapiens 0 339
ENST00000478319 ST6GALNAC6-004 processed_transcript Homo_sapiens 0 612
ENST00000480417 ST6GALNAC6-012 processed_transcript Homo_sapiens 0 699
ENST00000481355 ST6GALNAC6-001 processed_transcript Homo_sapiens 0 327
ENST00000485320 ST6GALNAC6-009 processed_transcript Homo_sapiens 0 1325
ENST00000494541 ST6GALNAC6-013 processed_transcript Homo_sapiens 0 525
ENST00000494611 ST6GALNAC6-005 processed_transcript Homo_sapiens 0 340
ENST00000527755 HINFP-004 retained_intron Homo_sapiens 0.0002 53
ENST00000542456 ST6GALNAC6-202 protein_coding Homo_sapiens 0 603
ENST00000590054 CCDC159-003 retained_intron Homo_sapiens 0.000001 58
ENST00000622357 ST6GALNAC6-203 protein_coding Homo_sapiens 0 1445

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