C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G patch domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097443 Gpatch2-002 ENSMUSG00000039210 10090 + 1:187215508-187235831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000097443
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000097443 1.416±0.24 1.354±0.17 2.572±0.51 0.656±0.06 1.109±0.08 1.811±0.32 1.811±0.08 0.754±0.00 2.914±0.00 1.741±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086S CIL_00086S_0002 VISTA 1:186622310-187223505
CIL_0007JY CIL_0007JY_0002 UCNEbase 1:186701249-188943182
CIL_000994 CIL_000994_0002 VISTA 1:186948277-187549469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366934 GPATCH2-002 protein_coding Homo_sapiens 0 1127
ENST00000366935 GPATCH2-001 protein_coding Homo_sapiens 0 1127
ENST00000470014 GPATCH2-005 processed_transcript Homo_sapiens 2e-22 110

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