C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pre B cell leukemia homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097471 Pbx1-009 ENSMUSG00000052534 10090 - 1:168158370-168164662 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094F CIL_00094F_0002 VISTA 1:167868619-168470073
CIL_0008FU CIL_0008FU_0002 VISTA 1:167968572-168569856
CIL_00089R CIL_00089R_0002 VISTA 1:167994791-168596737
CIL_00096W CIL_00096W_0002 VISTA 1:167999764-168600980
CIL_0009AB CIL_0009AB_0002 VISTA 1:168027071-168628497
CIL_0008NA CIL_0008NA_0002 VISTA 1:168041597-168642833
CIL_0007US CIL_0007US_0002 VISTA 1:168057093-168658535

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367897 PBX1-002 protein_coding Homo_sapiens 0 630
ENST00000375050 PBX2-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000383270 PBX2-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000420432 PBX2-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000420696 PBX1-001 protein_coding Homo_sapiens 0 675
ENST00000431537 PBX2-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000433552 PBX2-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000453487 PBX2-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000453961 PBX2-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000461053 PBX2-005 retained_intron Homo_sapiens 0.00000000000008 82
ENST00000461857 PBX2-005 retained_intron Homo_sapiens 0.00000000000008 82
ENST00000465089 PBX1-005 retained_intron Homo_sapiens 0 675
ENST00000468104 PBX1-004 processed_transcript Homo_sapiens 0 675
ENST00000471428 PBX2-005 retained_intron Homo_sapiens 0.00000000000008 82
ENST00000479667 PBX2-005 retained_intron Homo_sapiens 0.00000000000008 82
ENST00000487027 PBX2-005 retained_intron Homo_sapiens 0.00000000000008 82
ENST00000491147 PBX2-005 retained_intron Homo_sapiens 0.00000000000008 82
ENST00000495300 PBX2-005 retained_intron Homo_sapiens 0.00000000000008 82
ENST00000496120 PBX1-016 processed_transcript Homo_sapiens 0 675
ENST00000540236 PBX1-201 protein_coding Homo_sapiens 0 675
ENST00000559240 PBX1-012 protein_coding Homo_sapiens 0 675
ENST00000560469 PBX1-015 processed_transcript Homo_sapiens 0 675
ENST00000560641 PBX1-017 protein_coding Homo_sapiens 0 675
ENST00000612123 PBX1-202 protein_coding Homo_sapiens 0 675

Loading