C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PNN interacting serine/arginine-rich
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098238 Pnisr-005 ENSMUSG00000028248 10090 + 4:21848055-21876467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098238 5.699±2.65 19.730±2.67 16.952±8.26 28.802±5.25 6.463±2.95 8.632±1.96 1.869±0.39 3.171±0.83 6.287±3.41 8.488±3.61 5.886±1.79 18.007±11.28 9.068±2.80 4.717±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123980 pnisr-002 protein_coding Danio_rerio 4e-28 132
ENSDART00000124515 pnisr-001 protein_coding Danio_rerio 8e-25 121
ENST00000369239 PNISR-007 protein_coding Homo_sapiens 0 4518
ENST00000438806 PNISR-201 protein_coding Homo_sapiens 0 3831
ENST00000460600 PNISR-004 processed_transcript Homo_sapiens 0 462
ENST00000463021 PNISR-009 processed_transcript Homo_sapiens 0 416
ENST00000476159 PNISR-002 processed_transcript Homo_sapiens 0 459
ENST00000478777 PNISR-008 nonsense_mediated_decay Homo_sapiens 0 1546
ENST00000481229 PNISR-003 processed_transcript Homo_sapiens 0 473
ENST00000492294 PNISR-001 processed_transcript Homo_sapiens 0 438

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