C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shal-related family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098761 Kcnd3-002 ENSMUSG00000040896 10090 + 3:105452330-105674002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000098761
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098761 0.213±0.02 3.742±2.20 4.975±1.73 0.029±0.01 0.582±0.10 0.553±0.17 0.032±0.03 0.092±0.00 0.012±0.01 1.702±0.71 0.086±0.01 0.299±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075Y CIL_00075Y_0002 CGP 3:105452330-105687574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005250 IBA A-type (transient outward) potassium channel activity
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000042673 kcnd2-201 protein_coding Danio_rerio 0 752
ENSDART00000138890 kcnd2-001 protein_coding Danio_rerio 0 752
ENST00000218176 KCND1-001 protein_coding Homo_sapiens 0 630
ENST00000302127 KCND3-201 protein_coding Homo_sapiens 0 2859
ENST00000315987 KCND3-001 protein_coding Homo_sapiens 0 1989
ENST00000369697 KCND3-002 protein_coding Homo_sapiens 0 3387

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