C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit zeta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100162 Copz1-201 ENSMUSG00000060992 10090 + 15:103272911-103299862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100162
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100162 64.231±7.93 43.263±3.38 58.294±5.93 46.852±19.98 53.126±19.22 51.470±3.66 25.401±1.29 63.214±3.76 95.600±21.28 42.000±2.62 19.538±1.31 55.795±6.34 69.862±15.26 22.718±8.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SU CIL_0007SU_0002 VISTA 15:102699781-103302958
CIL_00084M CIL_00084M_0002 VISTA 15:102713812-103314964
CIL_0002TK CIL_0002TK_0003 CGP 15:103248212-103299862
CIL_00003K CIL_00003K_0002 CGP 15:103272911-103310438

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006886 IEA intracellular protein transport
GO:0006891 ISS intra-Golgi vesicle-mediated transport
GO:0030126 ISS COPI vesicle coat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262061 COPZ1-001 protein_coding Homo_sapiens 0 802
ENST00000441884 AF277315.19-001 processed_pseudogene Homo_sapiens 3e-27 122
ENST00000455864 COPZ1-004 protein_coding Homo_sapiens 0 669
ENST00000548076 COPZ1-007 processed_transcript Homo_sapiens 0 278
ENST00000548281 COPZ1-013 processed_transcript Homo_sapiens 0 412
ENST00000548753 COPZ1-014 protein_coding Homo_sapiens 0 758
ENST00000549043 COPZ1-002 protein_coding Homo_sapiens 0 758
ENST00000549116 COPZ1-012 protein_coding Homo_sapiens 0 416
ENST00000550027 COPZ1-016 retained_intron Homo_sapiens 0 658
ENST00000550171 COPZ1-003 nonsense_mediated_decay Homo_sapiens 0 412
ENST00000550713 COPZ1-015 protein_coding Homo_sapiens 0 542
ENST00000551412 COPZ1-011 retained_intron Homo_sapiens 0 595
ENST00000551779 COPZ1-005 protein_coding Homo_sapiens 0 721
ENST00000551962 COPZ1-009 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000552218 COPZ1-010 protein_coding Homo_sapiens 0 472
ENST00000552362 COPZ1-017 protein_coding Homo_sapiens 0 651
ENST00000552848 COPZ1-006 protein_coding Homo_sapiens 0 420
ENST00000553009 COPZ1-008 retained_intron Homo_sapiens 0 279
ENST00000553231 COPZ1-018 protein_coding Homo_sapiens 0 588

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