C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit zeta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262061 COPZ1-001 ENSG00000111481 9606 + 12:54325127-54351849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262061
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262061 24.350±0.00 39.988±0.00 3.299±0.00 17.147±12.32 18.590±16.26 18.257±11.30 10.919±8.81 22.921±18.02 17.406±15.25 23.377±20.48 15.338±9.16 37.722±23.55 57.473±19.17 24.683±14.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SU CIL_0007SU_0001 VISTA 12:53718454-54321661
CIL_00084M CIL_00084M_0001 VISTA 12:53732854-54334005
CIL_0002TK CIL_0002TK_0002 CGP 12:54292111-54351849
CIL_00003K CIL_00003K_0001 CGP 12:54301202-54364487

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006890 TAS retrograde vesicle-mediated transport, Golgi to ER
GO:0006891 ISS intra-Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030126 ISS COPI vesicle coat
GO:0048205 TAS COPI coating of Golgi vesicle
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100162 Copz1-201 protein_coding Mus_musculus 0 802

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