C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit zeta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455864 COPZ1-004 ENSG00000111481 9606 + 12:54325139-54350913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000455864
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000455864 6.142±0.00 11.266±0.00 8.344±0.00 10.218±0.00 5.632±0.00 4.215±0.00 14.008±0.00 3.112±0.00 10.035±0.00 14.702±9.07 21.895±4.75 13.160±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SU CIL_0007SU_0001 VISTA 12:53718454-54321661
CIL_00084M CIL_00084M_0001 VISTA 12:53732854-54334005
CIL_0002TK CIL_0002TK_0002 CGP 12:54292111-54351849
CIL_00003K CIL_00003K_0001 CGP 12:54301202-54364487

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006890 TAS retrograde vesicle-mediated transport, Golgi to ER
GO:0006891 ISS intra-Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030126 ISS COPI vesicle coat
GO:0048205 TAS COPI coating of Golgi vesicle
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100162 Copz1-201 protein_coding Mus_musculus 0 669

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