C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: misshapen-like kinase 1 (zebrafish)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102559 Mink1-007 ENSMUSG00000020827 10090 + 11:70562898-70614478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102559
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102559 4.405±0.77 4.271±0.88 7.201±1.03 32.185±23.07 2.670±0.00 4.904±0.43 5.559±0.72 1.457±0.13 9.460±0.42 3.701±1.63 6.366±1.81 3.334±0.59 3.545±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RG CIL_0001RG_0002 CGP 11:70540064-70614483
CIL_0001R8 CIL_0001R8_0002 CGP 11:70562881-70619216

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005524 IDA ATP binding
GO:0005737 ISS cytoplasm
GO:0006468 IDA protein phosphorylation
GO:0006950 IDA response to stress
GO:0007268 ISS synaptic transmission
GO:0007275 IEP multicellular organismal development
GO:0030054 IEA cell junction
GO:0035556 IDA intracellular signal transduction
GO:0042995 IEA cell projection
GO:0045060 IMP negative thymic T cell selection
GO:0045211 IEA postsynaptic membrane
GO:0046777 ISS protein autophosphorylation
GO:0048813 ISS dendrite morphogenesis
GO:0050790 IEA regulation of catalytic activity
GO:2000311 ISS regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051234 tnika-001 protein_coding Danio_rerio 0 662
ENSDART00000097792 tnikb-201 protein_coding Danio_rerio 0 651
ENSDART00000008374 tnikb-002 protein_coding Danio_rerio 0 634
ENSDART00000138089 tnikb-003 processed_transcript Danio_rerio 0 276
ENST00000293780 CHRNE-001 protein_coding Homo_sapiens 0 213
ENST00000347992 MINK1-002 protein_coding Homo_sapiens 0 6052
ENST00000355280 MINK1-001 protein_coding Homo_sapiens 0 2963
ENST00000453408 MINK1-003 protein_coding Homo_sapiens 0 2333
ENST00000571207 MINK1-006 nonsense_mediated_decay Homo_sapiens 0 4109
ENST00000572304 MINK1-012 retained_intron Homo_sapiens 5.99756e-43 178
ENST00000572330 MINK1-004 retained_intron Homo_sapiens 0 3315
ENST00000574453 MINK1-005 nonsense_mediated_decay Homo_sapiens 0 5670
ENST00000574871 MINK1-008 retained_intron Homo_sapiens 0 824
ENST00000575511 MINK1-013 retained_intron Homo_sapiens 0 514
ENST00000576037 MINK1-014 protein_coding Homo_sapiens 0 649
ENST00000577021 MINK1-009 nonsense_mediated_decay Homo_sapiens 0 826

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