C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XV, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102917 Col15a1-001 ENSMUSG00000028339 10090 + 4:47208161-47313167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102917
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102917 101.182±30.67 6.706±1.66 27.524±1.15 1.640±0.20 36.638±11.98 15.057±1.79 18.236±1.20 8.954±1.34 0.170±0.07 6.189±1.76 3.783±1.31 35.541±9.58 4.918±4.80 1.225±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000200 CIL_000200_0002 CGP 4:47091909-47313167
CIL_0007BK CIL_0007BK_0003 CGP 4:47208161-47414931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005581 IEA collagen trimer
GO:0005604 IDA basement membrane
GO:0005615 IEA extracellular space
GO:0007155 IEA cell adhesion
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375001 COL15A1-001 protein_coding Homo_sapiens 0 2279
ENST00000610452 COL15A1-201 protein_coding Homo_sapiens 0 2279

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