C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102934 Rnf38-001 ENSMUSG00000035696 10090 - 4:44126215-44167951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainLiverMuscleENSMUST00000102934
Transcript ID Adrenal Bladder Brain Liver Muscle
ENSMUST00000102934 2.897±0.00 3.362±0.28 6.790±0.00 0.703±0.00 0.570±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K4 CIL_0006K4_0002 CGP 4:44034075-44233789
CIL_0006K5 CIL_0006K5_0002 CGP 4:44126210-44364675

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259605 RNF38-001 protein_coding Homo_sapiens 0 3574
ENST00000350199 RNF38-201 protein_coding Homo_sapiens 0 3315
ENST00000353739 RNF38-002 protein_coding Homo_sapiens 0 3314
ENST00000357058 RNF38-202 protein_coding Homo_sapiens 0 3819
ENST00000377877 RNF38-003 protein_coding Homo_sapiens 0 2032
ENST00000377885 RNF38-203 protein_coding Homo_sapiens 0 3579
ENST00000484621 RNF38-004 processed_transcript Homo_sapiens 0 671
ENST00000488058 RNF38-006 processed_transcript Homo_sapiens 0 486
ENST00000491349 RNF38-005 processed_transcript Homo_sapiens 0 1386
ENST00000611646 RNF38-204 protein_coding Homo_sapiens 0 2977

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