C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006K5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137075-ENSG00000165304 CGP 9606 9:36336396-36677683
GeneTranscriptPositionBiotype
ENSG00000137075 (RNF38)
ring finger protein 38 		ENST00000259605 (RNF38-001) 36336396-36400216 protein_coding
ENST00000350199 (RNF38-201) 36336404-36400923 protein_coding
ENST00000353739 (RNF38-002) 36336396-36400299 protein_coding
ENST00000357058 (RNF38-202) 36336404-36400923 protein_coding
ENST00000377877 (RNF38-003) 36339581-36400872 protein_coding
ENST00000377885 (RNF38-203) 36336404-36401198 protein_coding
ENST00000484621 (RNF38-004) 36369723-36401198 processed_transcript
ENST00000488058 (RNF38-006) 36376008-36487548 processed_transcript
ENST00000491349 (RNF38-005) 36356340-36401196 processed_transcript
ENST00000611646 (RNF38-204) 36336404-36400299 protein_coding
ENSG00000165304 (MELK)
maternal embryonic leucine zipper kinase 		ENST00000298048 (MELK-001) 36572862-36677682 protein_coding
ENST00000480021 (MELK-004) 36630007-36633200 processed_transcript
ENST00000487398 (MELK-002) 36572924-36630367 processed_transcript
ENST00000489766 (MELK-003) 36572897-36607622 processed_transcript
ENST00000495529 (MELK-005) 36572897-36633155 processed_transcript
ENST00000536329 (MELK-201) 36572862-36677683 protein_coding
ENST00000536860 (MELK-202) 36572862-36677683 protein_coding
ENST00000536987 (MELK-203) 36572862-36677683 protein_coding
ENST00000541717 (MELK-204) 36572862-36677683 protein_coding
ENST00000543751 (MELK-205) 36572862-36677683 protein_coding
ENST00000545008 (MELK-206) 36572862-36677683 protein_coding
CIL_0006K5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035696-ENSMUSG00000035683 CGP 10090 4:44126210-44364675
GeneTranscriptPositionBiotype
ENSMUSG00000035683 (Melk)
maternal embryonic leucine zipper kinase 		ENSMUST00000045607 (Melk-001) 44300876-44364675 protein_coding
ENSMUST00000125708 (Melk-003) 44303568-44318070 protein_coding
ENSMUST00000137703 (Melk-002) 44302667-44325693 protein_coding
ENSMUST00000137759 (Melk-004) 44303568-44324268 processed_transcript
ENSMUSG00000035696 (Rnf38)
ring finger protein 38 		ENSMUST00000045793 (Rnf38-017) 44126215-44168339 protein_coding
ENSMUST00000098098 (Rnf38-004) 44126210-44167608 protein_coding
ENSMUST00000102934 (Rnf38-001) 44126215-44167951 protein_coding
ENSMUST00000107836 (Rnf38-006) 44129420-44158943 protein_coding
ENSMUST00000123844 (Rnf38-014) 44149114-44228312 processed_transcript
ENSMUST00000128426 (Rnf38-013) 44142295-44168287 protein_coding
ENSMUST00000129621 (Rnf38-012) 44149143-44167922 processed_transcript
ENSMUST00000136730 (Rnf38-003) 44129424-44167648 nonsense_mediated_decay
ENSMUST00000137194 (Rnf38-007) 44149107-44167535 processed_transcript
ENSMUST00000143337 (Rnf38-011) 44142393-44168005 protein_coding
ENSMUST00000145378 (Rnf38-009) 44129508-44139586 processed_transcript
ENSMUST00000145760 (Rnf38-016) 44142349-44168252 protein_coding
ENSMUST00000147302 (Rnf38-002) 44158973-44167492 processed_transcript
ENSMUST00000148869 (Rnf38-010) 44129506-44138952 processed_transcript
ENSMUST00000152216 (Rnf38-008) 44138466-44139666 processed_transcript
ENSMUST00000153116 (Rnf38-015) 44152434-44233789 processed_transcript
ENSMUST00000153384 (Rnf38-005) 44147484-44168283 processed_transcript
ENSMUSG00000081127 (Gm12677)
predicted gene 12677 		ENSMUST00000118668 (Gm12677-001) 44313427-44314058 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006K5_0001ENSG00000137075ENST00000259605ENST00000350199ENST00000353739ENST00000357058ENST00000377877ENST00000377885ENST00000484621ENST00000488058ENST00000491349ENST00000611646ENSG00000165304ENST00000298048ENST00000480021ENST00000487398ENST00000489766ENST00000495529ENST00000536329ENST00000536860ENST00000536987ENST00000541717ENST00000543751ENST00000545008CIL_0006K5_0002ENSMUSG00000035683ENSMUST00000045607ENSMUST00000125708ENSMUST00000137703ENSMUST00000137759ENSMUSG00000035696ENSMUST00000045793ENSMUST00000098098ENSMUST00000102934ENSMUST00000107836ENSMUST00000123844ENSMUST00000128426ENSMUST00000129621ENSMUST00000136730ENSMUST00000137194ENSMUST00000143337ENSMUST00000145378ENSMUST00000145760ENSMUST00000147302ENSMUST00000148869ENSMUST00000152216ENSMUST00000153116ENSMUST00000153384ENSMUSG00000081127ENSMUST00000118668
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006K5_0001ENSG00000137075ENST00000259605ENST00000350199ENST00000353739ENST00000357058ENST00000377877ENST00000377885ENSG00000165304ENST00000298048ENST00000480021ENST00000487398ENST00000489766ENST00000536329ENST00000536860ENST00000536987ENST00000541717ENST00000543751ENST00000545008CIL_0006K5_0002ENSMUSG00000035683ENSMUST00000045607ENSMUST00000125708ENSMUST00000137759ENSMUSG00000035696ENSMUST00000045793ENSMUST00000098098ENSMUST00000102934ENSMUST00000107836ENSMUST00000128426ENSMUST00000145378ENSMUSG00000081127ENSMUST00000118668
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137075 ENST00000259605 N/A N/A 2.234±0.00 5.139±0.00 1.803±0.00 1.008±0.00 1.402±0.00 N/A N/A 1.701±0.00 0.587±0.00 4.007±0.00 N/A N/A
ENST00000350199 6.347±0.00 4.220±0.00 N/A 6.705±0.00 6.676±0.00 5.973±4.11 4.222±0.00 6.768±0.00 1.154±0.00 6.707±0.00 3.424±0.00 7.338±3.43 5.221±0.94 3.571±0.00
ENST00000353739 N/A N/A N/A N/A N/A 1.133±0.00 N/A N/A 2.892±2.61 N/A N/A N/A 1.873±0.00 8.582±0.00
ENST00000357058 3.910±0.00 2.584±0.00 N/A 1.952±0.00 1.192±0.00 1.653±0.00 0.815±0.00 N/A 1.060±0.00 1.854±0.00 N/A 1.682±0.00 N/A 9.696±0.00
ENST00000377877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.582±10.39
ENST00000377885 N/A N/A 1.137±0.00 2.205±0.00 1.660±0.00 N/A 0.826±0.00 0.921±0.16 N/A 1.946±0.00 0.698±0.00 1.011±0.00 1.703±0.00 3.835±0.09
ENST00000484621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165304 ENST00000298048 N/A N/A N/A N/A 0.282±0.00 N/A 0.123±0.00 0.116±0.00 N/A N/A N/A 0.446±0.00 0.698±0.29 N/A
ENST00000480021 N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A
ENST00000487398 N/A N/A N/A N/A N/A 1.433±0.00 N/A N/A 0.075±0.00 0.073±0.00 N/A N/A N/A N/A
ENST00000489766 N/A N/A N/A N/A 1.139±0.00 N/A N/A N/A 0.539±0.00 N/A N/A N/A N/A N/A
ENST00000495529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536329 N/A N/A N/A N/A 0.230±0.00 N/A N/A 0.022±0.00 N/A 0.125±0.00 N/A N/A N/A N/A
ENST00000536860 N/A N/A N/A N/A 0.896±0.00 N/A N/A N/A N/A N/A N/A 0.732±0.00 N/A 1.811±0.00
ENST00000536987 N/A N/A 0.122±0.00 N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A 0.525±0.00 0.537±0.05 N/A
ENST00000541717 N/A N/A N/A N/A N/A 0.947±0.00 N/A N/A 0.088±0.00 N/A N/A N/A 0.347±0.01 N/A
ENST00000543751 N/A N/A N/A N/A 0.306±0.00 N/A N/A N/A N/A N/A N/A 2.630±2.89 1.168±0.78 N/A
ENST00000545008 0.094±0.00 N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A 2.041±0.00 0.437±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035683 ENSMUST00000045607 1.077±0.94 0.282±0.06 0.302±0.04 2.592±2.33 0.547±0.20 2.728±0.30 0.060±0.00 0.144±0.06 5.065±5.13 0.444±0.19 0.021±0.01 1.569±1.05 7.674±4.99 1.033±0.19
ENSMUST00000125708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.380±0.00 N/A
ENSMUST00000137703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137759 N/A N/A N/A N/A 0.230±0.00 N/A 0.066±0.00 0.093±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000035696 ENSMUST00000045793 5.657±1.87 21.410±5.94 8.638±0.00 13.141±4.54 19.230±4.23 14.185±6.43 4.129±2.77 5.683±1.51 3.109±1.24 17.382±4.84 0.847±0.22 41.359±4.76 3.551±1.51 N/A
ENSMUST00000098098 2.451±0.00 4.805±0.00 4.717±0.00 N/A 5.754±1.39 N/A 1.154±0.00 2.356±0.13 2.487±0.99 N/A 0.748±0.05 1.688±0.00 3.669±1.07 27.981±13.03
ENSMUST00000102934 N/A 2.897±0.00 3.362±0.28 6.790±0.00 N/A N/A N/A N/A 0.703±0.00 N/A 0.570±0.07 N/A N/A N/A
ENSMUST00000107836 N/A N/A N/A N/A 7.950±1.26 N/A 3.534±0.00 N/A N/A N/A N/A 21.150±0.00 N/A 186.051±102.66
ENSMUST00000123844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128426 12.021±0.00 N/A N/A 58.241±0.00 23.490±4.68 19.700±4.90 9.774±0.02 11.126±2.00 4.903±1.34 N/A N/A 56.766±7.44 N/A 216.263±29.58
ENSMUST00000129621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145378 N/A N/A N/A 7.661±0.00 N/A N/A N/A N/A N/A N/A N/A 24.278±0.00 25.781±1.27 178.791±0.00
ENSMUST00000145760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081127 ENSMUST00000118668 N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.04 N/A N/A 0.523±0.09 0.097±0.02 N/A

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