C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494250 STAM-005 ENSG00000136738 9606 + 10:17694926-17700241 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000494250
Transcript ID Placenta Testis
ENST00000494250 6.546±0.00 12.318±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BI CIL_0006BI_0001 CGP 10:17589032-17715914
CIL_00046E CIL_00046E_0002 CGP 10:17644125-17800868

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028050 Stam-002 protein_coding Mus_musculus 0 375
ENSMUST00000102960 Stam-001 protein_coding Mus_musculus 0 375
ENSMUST00000144944 Stam-003 processed_transcript Mus_musculus 0 246
ENSMUST00000121061 Gm12021-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000128777 Stam-004 processed_transcript Mus_musculus 2e-31 139

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