| Transcript ID | Brain | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENSMUST00000105500 | 13.998±0.00 | 27.593±0.00 | 32.836±11.54 | 48.283±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sorting nexin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000105500  |
Snx3-002 |
ENSMUSG00000019804 |
10090 | + |
10:42502030-42534787  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008YH | CIL_0008YH_0002 | VISTA | 10:41950904-42552282 |
| CIL_0009BP | CIL_0009BP_0002 | VISTA | 10:42334080-42935172 |
| CIL_0008G4 | CIL_0008G4_0002 | VISTA | 10:42335863-42936982 |
| CIL_0007KA | CIL_0007KA_0003 | UCNEbase | 10:42339928-43024116 |
| CIL_0005K5 | CIL_0005K5_0002 | CGP | 10:42502030-42583632 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005768 | IBA | endosome |
| GO:0006783 | ISO | heme biosynthetic process |
| GO:0032268 | IMP | regulation of cellular protein metabolic process |
| GO:0033157 | IMP | regulation of intracellular protein transport |
| GO:0033572 | IMP | transferrin transport |
| GO:0035091 | IBA | phosphatidylinositol binding |
| GO:0042541 | IMP | hemoglobin biosynthetic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000230085
|
SNX3-001 | protein_coding | Homo_sapiens | 0 | 499 |
|
ENST00000349379
|
SNX3-003 | protein_coding | Homo_sapiens | 0 | 726 |
|
ENST00000368979
|
SNX3-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 350 |
|
ENST00000426155
|
SNX3-004 | protein_coding | Homo_sapiens | 0 | 357 |
