| Transcript ID | Testis |
|---|---|
| ENSMUST00000107383 | 0.183±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000107383  |
Sema4b-002 |
ENSMUSG00000030539 |
10090 | + |
7:80186841-80221832  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00079J | CIL_00079J_0002 | CGP | 7:80094846-80226394 |
| CIL_0008AY | CIL_0008AY_0002 | VISTA | 7:80145068-80746500 |
| CIL_0000SV | CIL_0000SV_0002 | CGP | 7:80186841-80232813 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004872 | IEA | receptor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005886 | IDA | plasma membrane |
| GO:0007275 | IEA | multicellular organismal development |
| GO:0016020 | IDA | membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0045202 | IDA | synapse |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000113037
|
SEMA4C-201 | protein_coding | Danio_rerio | 0.000004 | 58 |
|
ENST00000332496
|
SEMA4B-002 | protein_coding | Homo_sapiens | 0 | 1607 |
|
ENST00000411539
|
SEMA4B-001 | protein_coding | Homo_sapiens | 0 | 1607 |
|
ENST00000558051
|
SEMA4B-014 | processed_transcript | Homo_sapiens | 0 | 433 |
|
ENST00000558065
|
SEMA4B-004 | retained_intron | Homo_sapiens | 0 | 1301 |
|
ENST00000558848
|
SEMA4B-012 | retained_intron | Homo_sapiens | 0 | 196 |
|
ENST00000559300
|
SEMA4B-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 248 |
|
ENST00000560089
|
SEMA4B-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1543 |
|
ENST00000561085
|
SEMA4B-010 | protein_coding | Homo_sapiens | 0 | 403 |
